Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GDNFP39905 TOMM20P2-201ENST00000540082 421 ntBASIC3.68□□□□□ -1.82
GDNFP39905 MIR6820-201ENST00000611508 62 ntBASIC3.68□□□□□ -1.82
GDNFP39905 AL021997.2-201ENST00000615674 271 ntBASIC3.68□□□□□ -1.82
GDNFP39905 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GDNFP39905 MIR6891-201ENST00000618788 93 ntBASIC3.68□□□□□ -1.82
GDNFP39905 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.68□□□□□ -1.82
GDNFP39905 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GDNFP39905 SRP72P2-201ENST00000344851 1979 ntBASIC3.68□□□□□ -1.82
GDNFP39905 AC118273.1-201ENST00000525324 3006 ntBASIC3.68□□□□□ -1.82
GDNFP39905 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.68□□□□□ -1.82
GDNFP39905 AC125257.1-201ENST00000560400 2930 ntBASIC3.68□□□□□ -1.82
GDNFP39905 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GDNFP39905 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.68□□□□□ -1.82
GDNFP39905 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GDNFP39905 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
GDNFP39905 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
GDNFP39905 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GDNFP39905 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GDNFP39905 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
GDNFP39905 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
GDNFP39905 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.67□□□□□ -1.82
GDNFP39905 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
GDNFP39905 RNU6-1285P-201ENST00000363480 105 ntBASIC3.67□□□□□ -1.82
GDNFP39905 Y_RNA.179-201ENST00000363844 90 ntBASIC3.67□□□□□ -1.82
GDNFP39905 Y_RNA.218-201ENST00000364218 104 ntBASIC3.67□□□□□ -1.82
GDNFP39905 RNU1-100P-201ENST00000365255 165 ntBASIC3.67□□□□□ -1.82
GDNFP39905 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.67□□□□□ -1.82
GDNFP39905 RNU6-1181P-201ENST00000384191 106 ntBASIC3.67□□□□□ -1.82
GDNFP39905 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
GDNFP39905 RNU6-239P-201ENST00000390990 99 ntBASIC3.67□□□□□ -1.82
GDNFP39905 RNA5SP332-201ENST00000391063 115 ntBASIC3.67□□□□□ -1.82
GDNFP39905 RPS16P5-201ENST00000406501 404 ntBASIC3.67□□□□□ -1.82
GDNFP39905 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.67□□□□□ -1.82
GDNFP39905 RPS20P10-201ENST00000451209 253 ntBASIC3.67□□□□□ -1.82
GDNFP39905 Y_RNA.637-201ENST00000459424 114 ntBASIC3.67□□□□□ -1.82
GDNFP39905 RPL21P126-201ENST00000470049 478 ntBASIC3.67□□□□□ -1.82
GDNFP39905 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.67□□□□□ -1.82
GDNFP39905 RNA5SP54-201ENST00000516951 92 ntBASIC3.67□□□□□ -1.82
GDNFP39905 DEFB131C-201ENST00000528817 165 ntBASIC3.67□□□□□ -1.82
GDNFP39905 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
GDNFP39905 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.67□□□□□ -1.82
GDNFP39905 AC090616.3-201ENST00000582184 217 ntBASIC3.67□□□□□ -1.82
GDNFP39905 AL359198.2-201ENST00000611836 194 ntBASIC3.67□□□□□ -1.82
GDNFP39905 MIR486-1-201ENST00000612171 68 ntBASIC3.67□□□□□ -1.82
GDNFP39905 U2.21-201ENST00000637295 81 ntBASIC3.67□□□□□ -1.82
GDNFP39905 CUL1P1-201ENST00000509510 2425 ntBASIC3.67□□□□□ -1.82
GDNFP39905 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.67□□□□□ -1.82
GDNFP39905 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
GDNFP39905 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
GDNFP39905 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.66□□□□□ -1.82
GDNFP39905 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
GDNFP39905 RNU6-778P-201ENST00000363269 103 ntBASIC3.66□□□□□ -1.82
GDNFP39905 Y_RNA.127-201ENST00000363386 109 ntBASIC3.66□□□□□ -1.82
GDNFP39905 RNU6-1141P-201ENST00000364520 107 ntBASIC3.66□□□□□ -1.82
GDNFP39905 SNORA20-201ENST00000384662 132 ntBASIC3.66□□□□□ -1.82
GDNFP39905 AL512633.1-201ENST00000399931 655 ntBASIC3.66□□□□□ -1.82
GDNFP39905 FTH1P15-201ENST00000406984 280 ntBASIC3.66□□□□□ -1.82
GDNFP39905 ELOCP21-201ENST00000412558 336 ntBASIC3.66□□□□□ -1.82
GDNFP39905 MTND4LP9-201ENST00000427694 174 ntBASIC3.66□□□□□ -1.82
GDNFP39905 RPL23AP1-201ENST00000428990 471 ntBASIC3.66□□□□□ -1.82
GDNFP39905 AC125238.1-201ENST00000448842 249 ntBASIC3.66□□□□□ -1.82
GDNFP39905 AL137159.1-201ENST00000452808 512 ntBASIC3.66□□□□□ -1.82
GDNFP39905 RPS29P33-201ENST00000456717 146 ntBASIC3.66□□□□□ -1.82
GDNFP39905 RPL35AP15-201ENST00000468042 339 ntBASIC3.66□□□□□ -1.82
GDNFP39905 RPL30P12-201ENST00000474666 353 ntBASIC3.66□□□□□ -1.82
GDNFP39905 Y_RNA.797-201ENST00000515977 94 ntBASIC3.66□□□□□ -1.82
GDNFP39905 SNORA25.12-201ENST00000516202 82 ntBASIC3.66□□□□□ -1.82
GDNFP39905 RNU6-919P-201ENST00000516731 104 ntBASIC3.66□□□□□ -1.82
GDNFP39905 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.66□□□□□ -1.82
GDNFP39905 CR383656.8-201ENST00000549046 145 ntBASIC3.66□□□□□ -1.82
GDNFP39905 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.66□□□□□ -1.82
GDNFP39905 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.66□□□□□ -1.82
GDNFP39905 FTX_3.1-201ENST00000610451 147 ntBASIC3.66□□□□□ -1.82
GDNFP39905 RN7SL722P-201ENST00000617780 284 ntBASIC3.66□□□□□ -1.82
GDNFP39905 RN7SL565P-201ENST00000618246 284 ntBASIC3.66□□□□□ -1.82
GDNFP39905 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
GDNFP39905 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.66□□□□□ -1.82
GDNFP39905 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
GDNFP39905 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
GDNFP39905 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
GDNFP39905 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
GDNFP39905 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
GDNFP39905 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
GDNFP39905 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.65□□□□□ -1.83
GDNFP39905 Y_RNA.71-201ENST00000362892 104 ntBASIC3.65□□□□□ -1.83
GDNFP39905 RN7SKP280-201ENST00000364196 304 ntBASIC3.65□□□□□ -1.83
GDNFP39905 RNU6-275P-201ENST00000364910 107 ntBASIC3.65□□□□□ -1.83
GDNFP39905 RNU1-73P-201ENST00000383971 164 ntBASIC3.65□□□□□ -1.83
GDNFP39905 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
GDNFP39905 RN7SKP61-201ENST00000410642 295 ntBASIC3.65□□□□□ -1.83
GDNFP39905 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.65□□□□□ -1.83
GDNFP39905 AC245028.1-201ENST00000423259 256 ntBASIC3.65□□□□□ -1.83
GDNFP39905 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.65□□□□□ -1.83
GDNFP39905 RPS23P7-201ENST00000466210 444 ntBASIC3.65□□□□□ -1.83
GDNFP39905 RN7SL812P-201ENST00000493791 279 ntBASIC3.65□□□□□ -1.83
GDNFP39905 RNU7-121P-201ENST00000516604 62 ntBASIC3.65□□□□□ -1.83
GDNFP39905 RNA5SP143-201ENST00000516936 115 ntBASIC3.65□□□□□ -1.83
GDNFP39905 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.65□□□□□ -1.83
GDNFP39905 AC005255.1-201ENST00000593748 216 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms