Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC025449.1-201ENST00000603896 529 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 AC245008.1-201ENST00000608123 476 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 uc_338.20-201ENST00000621563 178 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.87□□□□□ -2.11
HOXA9P31269 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HOXA9P31269 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
HOXA9P31269 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
HOXA9P31269 CDC27P3-201ENST00000635418 1910 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 MIR378A-201ENST00000362177 66 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 Y_RNA.238-201ENST00000364441 102 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 RNU6-395P-201ENST00000365662 106 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 U8.10-201ENST00000384260 133 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 MIR454-201ENST00000390180 115 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 BTF3L4P1-201ENST00000413813 468 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.86□□□□□ -2.11
HOXA9P31269 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.86□□□□□ -2.11
HOXA9P31269 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.86□□□□□ -2.11
HOXA9P31269 AL161651.1-201ENST00000440882 223 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 AL078601.1-201ENST00000444542 271 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.86□□□□□ -2.11
HOXA9P31269 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.86□□□□□ -2.11
HOXA9P31269 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HOXA9P31269 AC092001.1-201ENST00000453012 261 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.86□□□□□ -2.11
HOXA9P31269 AL583843.1-201ENST00000456070 346 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 AL162395.1-201ENST00000457882 422 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 AC104806.1-201ENST00000508720 308 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.86□□□□□ -2.11
HOXA9P31269 MTND1P15-201ENST00000579262 949 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 MIR3611-201ENST00000584484 83 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 NBR2-204ENST00000587322 63 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 AL670379.4-201ENST00000605279 254 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 AC080013.6-201ENST00000606185 215 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 MIR502-201ENST00000606349 86 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 AC009161.2-201ENST00000624626 138 ntBASIC1.86□□□□□ -2.11
HOXA9P31269 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HOXA9P31269 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HOXA9P31269 RNU6-384P-201ENST00000364900 104 ntBASIC1.85□□□□□ -2.11
HOXA9P31269 MIR147B-201ENST00000390185 80 ntBASIC1.85□□□□□ -2.11
HOXA9P31269 AL356432.1-201ENST00000405809 419 ntBASIC1.85□□□□□ -2.11
HOXA9P31269 U6atac.2-201ENST00000408644 118 ntBASIC1.85□□□□□ -2.11
HOXA9P31269 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.85□□□□□ -2.11
HOXA9P31269 USP9YP6-201ENST00000413550 854 ntBASIC1.85□□□□□ -2.11
HOXA9P31269 AC016831.2-201ENST00000417179 352 ntBASIC1.85□□□□□ -2.11
HOXA9P31269 AL122001.1-201ENST00000457027 370 ntBASIC1.85□□□□□ -2.11
HOXA9P31269 AC116655.1-201ENST00000508324 901 ntBASIC1.85□□□□□ -2.11
HOXA9P31269 SNORD19.2-201ENST00000516978 73 ntBASIC1.85□□□□□ -2.11
HOXA9P31269 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.85□□□□□ -2.11
HOXA9P31269 AC135279.1-201ENST00000543493 504 ntBASIC1.85□□□□□ -2.11
HOXA9P31269 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.85□□□□□ -2.11
HOXA9P31269 AC105245.1-201ENST00000581934 244 ntBASIC1.85□□□□□ -2.11
HOXA9P31269 AC023043.2-201ENST00000589678 1026 ntBASIC1.85□□□□□ -2.11
HOXA9P31269 AL391646.1-201ENST00000603860 190 ntBASIC1.85□□□□□ -2.11
HOXA9P31269 AC093783.1-201ENST00000612976 329 ntBASIC1.85□□□□□ -2.11
HOXA9P31269 AC048344.4-201ENST00000619744 527 ntBASIC1.85□□□□□ -2.11
HOXA9P31269 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HOXA9P31269 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
HOXA9P31269 RNU6-661P-201ENST00000362409 107 ntBASIC1.84□□□□□ -2.11
HOXA9P31269 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
HOXA9P31269 RNU2-9P-201ENST00000410194 145 ntBASIC1.84□□□□□ -2.11
HOXA9P31269 RNA5SP489-201ENST00000410986 109 ntBASIC1.84□□□□□ -2.11
HOXA9P31269 Y_RNA.623-201ENST00000411128 95 ntBASIC1.84□□□□□ -2.11
HOXA9P31269 RNA5SP111-201ENST00000411386 101 ntBASIC1.84□□□□□ -2.11
HOXA9P31269 OR6C66P-201ENST00000414917 930 ntBASIC1.84□□□□□ -2.11
HOXA9P31269 AC016907.1-201ENST00000419483 435 ntBASIC1.84□□□□□ -2.11
HOXA9P31269 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.84□□□□□ -2.11
HOXA9P31269 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.84□□□□□ -2.11
HOXA9P31269 DNAJC19P4-201ENST00000440115 345 ntBASIC1.84□□□□□ -2.11
HOXA9P31269 AC003071.1-201ENST00000451219 789 ntBASIC1.84□□□□□ -2.11
HOXA9P31269 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.84□□□□□ -2.11
HOXA9P31269 AC023194.1-201ENST00000493084 308 ntBASIC1.84□□□□□ -2.11
HOXA9P31269 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXA9P31269 MTCO3P9-201ENST00000506989 781 ntBASIC1.84□□□□□ -2.11
HOXA9P31269 AC091133.4-201ENST00000511142 308 ntBASIC1.84□□□□□ -2.11
HOXA9P31269 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.84□□□□□ -2.11
HOXA9P31269 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.84□□□□□ -2.11
HOXA9P31269 RN7SKP298-201ENST00000515950 94 ntBASIC1.84□□□□□ -2.11
HOXA9P31269 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.84□□□□□ -2.11
HOXA9P31269 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXA9P31269 SUB1P2-201ENST00000556401 297 ntBASIC1.84□□□□□ -2.11
HOXA9P31269 AC092325.1-201ENST00000566449 554 ntBASIC1.84□□□□□ -2.11
HOXA9P31269 MIR548AC-201ENST00000585049 88 ntBASIC1.84□□□□□ -2.11
HOXA9P31269 Z99129.1-201ENST00000612510 255 ntBASIC1.84□□□□□ -2.11
HOXA9P31269 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.84□□□□□ -2.11
HOXA9P31269 ZNF702P-202ENST00000434269 1966 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 WWP1P1-201ENST00000466609 2769 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.83□□□□□ -2.12
HOXA9P31269 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 MIR412-201ENST00000362142 91 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 SNORA16.1-201ENST00000364597 132 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 RNU4-48P-201ENST00000365559 182 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 RNU6-116P-201ENST00000384042 109 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 RNU6-1029P-201ENST00000384109 107 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 RNU6-1103P-201ENST00000384150 107 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 Y_RNA.582-201ENST00000391023 95 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 RNU6-550P-201ENST00000391057 101 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 AC068050.1-201ENST00000394891 380 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 RNU6-387P-201ENST00000411331 105 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms