Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC009269.6-201ENST00000621778 588 ntBASIC-0.02□□□□□ -2.41
CLIP1P30622 AC138627.2-201ENST00000624202 601 ntBASIC-0.02□□□□□ -2.41
CLIP1P30622 AC120349.3-201ENST00000624377 529 ntBASIC-0.02□□□□□ -2.41
CLIP1P30622 AL590396.4-201ENST00000636779 956 ntBASIC-0.02□□□□□ -2.41
CLIP1P30622 Y_RNA.99-201ENST00000363138 105 ntBASIC-0.03□□□□□ -2.41
CLIP1P30622 Y_RNA.255-201ENST00000364581 97 ntBASIC-0.03□□□□□ -2.41
CLIP1P30622 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.03□□□□□ -2.41
CLIP1P30622 RNU6-331P-201ENST00000384724 107 ntBASIC-0.03□□□□□ -2.41
CLIP1P30622 CCNG1P1-201ENST00000406783 885 ntBASIC-0.03□□□□□ -2.41
CLIP1P30622 MTCYBP38-201ENST00000417160 1123 ntBASIC-0.03□□□□□ -2.41
CLIP1P30622 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.03□□□□□ -2.41
CLIP1P30622 MTCO3P2-201ENST00000457365 171 ntBASIC-0.03□□□□□ -2.41
CLIP1P30622 SNORA31.2-201ENST00000516019 134 ntBASIC-0.03□□□□□ -2.41
CLIP1P30622 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.03□□□□□ -2.41
CLIP1P30622 AL356057.1-201ENST00000533798 831 ntBASIC-0.03□□□□□ -2.41
CLIP1P30622 AC060771.1-201ENST00000582031 164 ntBASIC-0.03□□□□□ -2.41
CLIP1P30622 AP001429.1-201ENST00000602568 530 ntBASIC-0.03□□□□□ -2.41
CLIP1P30622 Z98751.3-201ENST00000604447 521 ntBASIC-0.03□□□□□ -2.41
CLIP1P30622 AC105148.1-201ENST00000604961 409 ntBASIC-0.03□□□□□ -2.41
CLIP1P30622 AC018926.1-201ENST00000616335 435 ntBASIC-0.03□□□□□ -2.41
CLIP1P30622 AL603758.1-201ENST00000618654 241 ntBASIC-0.03□□□□□ -2.41
CLIP1P30622 AC079416.3-201ENST00000624479 549 ntBASIC-0.03□□□□□ -2.41
CLIP1P30622 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC-0.03□□□□□ -2.41
CLIP1P30622 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
CLIP1P30622 SNORD44.1-201ENST00000363202 61 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 MIR421-201ENST00000365696 85 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 MIR194-1-201ENST00000384892 85 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC-0.04□□□□□ -2.42
CLIP1P30622 CECR9-201ENST00000453421 199 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC-0.04□□□□□ -2.42
CLIP1P30622 AC022493.2-201ENST00000506122 481 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 AC011406.1-201ENST00000512440 370 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 HMGB1P33-201ENST00000563485 527 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 AL357094.1-201ENST00000603845 844 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 AC108676.2-201ENST00000605225 163 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 LARP7P1-201ENST00000605576 316 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 AC016252.1-201ENST00000609721 474 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 FAS-AS1.2-201ENST00000620386 170 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC-0.04□□□□□ -2.42
CLIP1P30622 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
CLIP1P30622 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
CLIP1P30622 SNORD114-31-201ENST00000363219 75 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 RNU4-45P-201ENST00000365469 141 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 RNU6-969P-201ENST00000383900 105 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 RNU6-658P-201ENST00000384606 106 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.04□□□□□ -2.42
CLIP1P30622 AC099677.2-201ENST00000436385 175 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 MTCO3P18-201ENST00000440206 761 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 AC048334.1-201ENST00000477975 159 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 HMGB1P30-201ENST00000492455 606 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 MTCO3P7-201ENST00000510008 774 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 MTCYBP43-201ENST00000513621 740 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 AC112206.3-201ENST00000514578 389 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 SNORA3.4-201ENST00000515969 96 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 RNA5SP290-201ENST00000517133 127 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 AC002545.1-201ENST00000592511 181 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC-0.04□□□□□ -2.42
CLIP1P30622 AC130454.1-201ENST00000622948 401 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
CLIP1P30622 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.04□□□□□ -2.42
CLIP1P30622 AC245060.5-201ENST00000610778 3293 ntBASIC-0.05□□□□□ -2.42
CLIP1P30622 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.05□□□□□ -2.42
CLIP1P30622 SNORD95.1-201ENST00000364099 68 ntBASIC-0.05□□□□□ -2.42
CLIP1P30622 RNU1-39P-201ENST00000383897 165 ntBASIC-0.05□□□□□ -2.42
CLIP1P30622 MTND4P20-201ENST00000424125 869 ntBASIC-0.05□□□□□ -2.42
CLIP1P30622 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.05□□□□□ -2.42
CLIP1P30622 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-0.05□□□□□ -2.42
CLIP1P30622 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC-0.05□□□□□ -2.42
CLIP1P30622 AC117525.1-201ENST00000515228 503 ntBASIC-0.05□□□□□ -2.42
CLIP1P30622 SNORD79.1-201ENST00000516069 84 ntBASIC-0.05□□□□□ -2.42
CLIP1P30622 RN7SKP12-201ENST00000516275 143 ntBASIC-0.05□□□□□ -2.42
CLIP1P30622 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.05□□□□□ -2.42
CLIP1P30622 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.05□□□□□ -2.42
CLIP1P30622 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-0.05□□□□□ -2.42
CLIP1P30622 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.05□□□□□ -2.42
CLIP1P30622 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.05□□□□□ -2.42
CLIP1P30622 AC012065.4-201ENST00000602445 679 ntBASIC-0.05□□□□□ -2.42
CLIP1P30622 AC107304.1-201ENST00000604229 296 ntBASIC-0.05□□□□□ -2.42
CLIP1P30622 AC092354.1-201ENST00000606057 376 ntBASIC-0.05□□□□□ -2.42
CLIP1P30622 AC239868.4-201ENST00000608318 671 ntBASIC-0.05□□□□□ -2.42
CLIP1P30622 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-0.05□□□□□ -2.42
CLIP1P30622 AC097372.5-201ENST00000623665 376 ntBASIC-0.05□□□□□ -2.42
CLIP1P30622 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.05□□□□□ -2.42
CLIP1P30622 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.06□□□□□ -2.42
CLIP1P30622 RNA5SP98-201ENST00000363158 137 ntBASIC-0.06□□□□□ -2.42
CLIP1P30622 RNU6-944P-201ENST00000364023 107 ntBASIC-0.06□□□□□ -2.42
CLIP1P30622 RNU6-1327P-201ENST00000365302 105 ntBASIC-0.06□□□□□ -2.42
CLIP1P30622 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.06□□□□□ -2.42
CLIP1P30622 RNU6-160P-201ENST00000384591 107 ntBASIC-0.06□□□□□ -2.42
CLIP1P30622 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
CLIP1P30622 DAP3P1-201ENST00000441522 278 ntBASIC-0.06□□□□□ -2.42
CLIP1P30622 AL031313.1-201ENST00000448435 256 ntBASIC-0.06□□□□□ -2.42
CLIP1P30622 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC-0.06□□□□□ -2.42
CLIP1P30622 AC233266.1-201ENST00000454518 96 ntBASIC-0.06□□□□□ -2.42
CLIP1P30622 AL160314.1-201ENST00000490836 438 ntBASIC-0.06□□□□□ -2.42
CLIP1P30622 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.06□□□□□ -2.42
CLIP1P30622 AC010460.2-201ENST00000509054 677 ntBASIC-0.06□□□□□ -2.42
CLIP1P30622 MTCYBP40-201ENST00000509390 1135 ntBASIC-0.06□□□□□ -2.42
CLIP1P30622 ACA59.2-201ENST00000517061 156 ntBASIC-0.06□□□□□ -2.42
CLIP1P30622 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms