Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.53□□□□□ -2
BDNFP23560 RN7SL429P-201ENST00000479090 223 ntBASIC2.53□□□□□ -2
BDNFP23560 RN7SL489P-201ENST00000486185 223 ntBASIC2.53□□□□□ -2
BDNFP23560 RN7SL327P-201ENST00000488659 223 ntBASIC2.53□□□□□ -2
BDNFP23560 RPS27P27-201ENST00000498779 255 ntBASIC2.53□□□□□ -2
BDNFP23560 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.53□□□□□ -2
BDNFP23560 MRPS17P9-201ENST00000511924 393 ntBASIC2.53□□□□□ -2
BDNFP23560 MTND3P5-201ENST00000512798 333 ntBASIC2.53□□□□□ -2
BDNFP23560 AL356057.1-201ENST00000533798 831 ntBASIC2.53□□□□□ -2
BDNFP23560 MTCO3P23-201ENST00000561363 289 ntBASIC2.53□□□□□ -2
BDNFP23560 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.53□□□□□ -2
BDNFP23560 AC025449.1-201ENST00000603896 529 ntBASIC2.53□□□□□ -2
BDNFP23560 AC103810.6-201ENST00000606708 136 ntBASIC2.53□□□□□ -2
BDNFP23560 RN7SL853P-201ENST00000617250 223 ntBASIC2.53□□□□□ -2
BDNFP23560 U1.36-201ENST00000620684 176 ntBASIC2.53□□□□□ -2
BDNFP23560 AC097372.5-201ENST00000623665 376 ntBASIC2.53□□□□□ -2
BDNFP23560 MIR1291-201ENST00000627649 87 ntBASIC2.53□□□□□ -2
BDNFP23560 ELL2P3-201ENST00000457883 1602 ntBASIC2.53□□□□□ -2
BDNFP23560 AP000568.1-201ENST00000282964 442 ntBASIC2.52□□□□□ -2.01
BDNFP23560 RNU6-944P-201ENST00000364023 107 ntBASIC2.52□□□□□ -2.01
BDNFP23560 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.52□□□□□ -2.01
BDNFP23560 SNORA41-201ENST00000384675 132 ntBASIC2.52□□□□□ -2.01
BDNFP23560 SNORA46.1-201ENST00000391069 153 ntBASIC2.52□□□□□ -2.01
BDNFP23560 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
BDNFP23560 AL356432.1-201ENST00000405809 419 ntBASIC2.52□□□□□ -2.01
BDNFP23560 GSTA9P-201ENST00000406231 611 ntBASIC2.52□□□□□ -2.01
BDNFP23560 RNU4-53P-201ENST00000410828 140 ntBASIC2.52□□□□□ -2.01
BDNFP23560 MTND1P23-201ENST00000416931 372 ntBASIC2.52□□□□□ -2.01
BDNFP23560 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.52□□□□□ -2.01
BDNFP23560 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.52□□□□□ -2.01
BDNFP23560 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
BDNFP23560 FDX1P2-201ENST00000450769 375 ntBASIC2.52□□□□□ -2.01
BDNFP23560 AC092436.1-201ENST00000506450 503 ntBASIC2.52□□□□□ -2.01
BDNFP23560 AC010486.3-201ENST00000511602 785 ntBASIC2.52□□□□□ -2.01
BDNFP23560 AC026407.1-201ENST00000518369 204 ntBASIC2.52□□□□□ -2.01
BDNFP23560 MIR4528-201ENST00000577763 90 ntBASIC2.52□□□□□ -2.01
BDNFP23560 AL034555.1-201ENST00000604816 211 ntBASIC2.52□□□□□ -2.01
BDNFP23560 AC013412.1-201ENST00000610687 192 ntBASIC2.52□□□□□ -2.01
BDNFP23560 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
BDNFP23560 SNORD115-3-201ENST00000363100 82 ntBASIC2.51□□□□□ -2.01
BDNFP23560 Y_RNA.99-201ENST00000363138 105 ntBASIC2.51□□□□□ -2.01
BDNFP23560 RNU6-142P-201ENST00000384019 107 ntBASIC2.51□□□□□ -2.01
BDNFP23560 SNORA80E-201ENST00000384744 137 ntBASIC2.51□□□□□ -2.01
BDNFP23560 AF228730.1-201ENST00000397972 663 ntBASIC2.51□□□□□ -2.01
BDNFP23560 AL357139.1-201ENST00000407792 426 ntBASIC2.51□□□□□ -2.01
BDNFP23560 RNU2-48P-201ENST00000410694 191 ntBASIC2.51□□□□□ -2.01
BDNFP23560 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.51□□□□□ -2.01
BDNFP23560 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.51□□□□□ -2.01
BDNFP23560 IFNA20P-201ENST00000436840 528 ntBASIC2.51□□□□□ -2.01
BDNFP23560 AC243964.1-201ENST00000441814 261 ntBASIC2.51□□□□□ -2.01
BDNFP23560 USP9YP29-201ENST00000445112 563 ntBASIC2.51□□□□□ -2.01
BDNFP23560 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.51□□□□□ -2.01
BDNFP23560 AL118520.1-201ENST00000450770 291 ntBASIC2.51□□□□□ -2.01
BDNFP23560 AC013470.1-201ENST00000453438 462 ntBASIC2.51□□□□□ -2.01
BDNFP23560 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.51□□□□□ -2.01
BDNFP23560 RNU7-167P-201ENST00000459160 62 ntBASIC2.51□□□□□ -2.01
BDNFP23560 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
BDNFP23560 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
BDNFP23560 RNU5F-2P-201ENST00000516066 82 ntBASIC2.51□□□□□ -2.01
BDNFP23560 RN7SKP219-201ENST00000516825 296 ntBASIC2.51□□□□□ -2.01
BDNFP23560 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.51□□□□□ -2.01
BDNFP23560 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
BDNFP23560 AGGF1P4-201ENST00000568249 801 ntBASIC2.51□□□□□ -2.01
BDNFP23560 AC004223.2-201ENST00000590309 544 ntBASIC2.51□□□□□ -2.01
BDNFP23560 CYP2C61P-201ENST00000604072 290 ntBASIC2.51□□□□□ -2.01
BDNFP23560 AL359314.1-201ENST00000616913 261 ntBASIC2.51□□□□□ -2.01
BDNFP23560 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.51□□□□□ -2.01
BDNFP23560 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
BDNFP23560 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
BDNFP23560 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.51□□□□□ -2.01
BDNFP23560 AC007336.1-201ENST00000576365 3828 ntBASIC2.5□□□□□ -2.01
BDNFP23560 AC016717.2-201ENST00000609089 5141 ntBASIC2.5□□□□□ -2.01
BDNFP23560 KPNA2P1-201ENST00000458289 1591 ntBASIC2.5□□□□□ -2.01
BDNFP23560 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
BDNFP23560 RNU6-552P-201ENST00000362869 119 ntBASIC2.5□□□□□ -2.01
BDNFP23560 Y_RNA.77-201ENST00000362962 107 ntBASIC2.5□□□□□ -2.01
BDNFP23560 RNU6-1285P-201ENST00000363480 105 ntBASIC2.5□□□□□ -2.01
BDNFP23560 RNU6-1303P-201ENST00000364841 107 ntBASIC2.5□□□□□ -2.01
BDNFP23560 DEFA7P-201ENST00000382676 285 ntBASIC2.5□□□□□ -2.01
BDNFP23560 SNORA16.2-201ENST00000390991 127 ntBASIC2.5□□□□□ -2.01
BDNFP23560 AC078809.1-201ENST00000427601 140 ntBASIC2.5□□□□□ -2.01
BDNFP23560 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.5□□□□□ -2.01
BDNFP23560 TRBV12-1-201ENST00000479785 344 ntBASIC2.5□□□□□ -2.01
BDNFP23560 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.5□□□□□ -2.01
BDNFP23560 AC008549.1-201ENST00000512900 643 ntBASIC2.5□□□□□ -2.01
BDNFP23560 RNA5SP24-201ENST00000516478 95 ntBASIC2.5□□□□□ -2.01
BDNFP23560 RNA5SP281-201ENST00000516504 135 ntBASIC2.5□□□□□ -2.01
BDNFP23560 RNA5SP402-201ENST00000517148 110 ntBASIC2.5□□□□□ -2.01
BDNFP23560 AP002770.2-201ENST00000543613 532 ntBASIC2.5□□□□□ -2.01
BDNFP23560 TRAV32-201ENST00000553993 340 ntBASIC2.5□□□□□ -2.01
BDNFP23560 MTND3P12-201ENST00000559068 328 ntBASIC2.5□□□□□ -2.01
BDNFP23560 AC008752.3-201ENST00000588113 712 ntBASIC2.5□□□□□ -2.01
BDNFP23560 AC107304.1-201ENST00000604229 296 ntBASIC2.5□□□□□ -2.01
BDNFP23560 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.5□□□□□ -2.01
BDNFP23560 AC064859.1-201ENST00000624741 174 ntBASIC2.5□□□□□ -2.01
BDNFP23560 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.5□□□□□ -2.01
BDNFP23560 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.5□□□□□ -2.01
BDNFP23560 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
BDNFP23560 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
BDNFP23560 AC092268.1-201ENST00000342691 405 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms