Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MTND1P2-201ENST00000430604 821 ntBASIC2.48□□□□□ -2.01
CDH3P22223 USP9YP28-201ENST00000435142 589 ntBASIC2.48□□□□□ -2.01
CDH3P22223 AC011816.1-201ENST00000441346 546 ntBASIC2.48□□□□□ -2.01
CDH3P22223 OSTCP8-201ENST00000445117 448 ntBASIC2.48□□□□□ -2.01
CDH3P22223 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.48□□□□□ -2.01
CDH3P22223 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH3P22223 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CDH3P22223 RNU5F-8P-201ENST00000515941 111 ntBASIC2.48□□□□□ -2.01
CDH3P22223 RNU6-1069P-201ENST00000516612 133 ntBASIC2.48□□□□□ -2.01
CDH3P22223 SNORA43.2-201ENST00000516652 128 ntBASIC2.48□□□□□ -2.01
CDH3P22223 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CDH3P22223 CYCSP27-201ENST00000527643 293 ntBASIC2.48□□□□□ -2.01
CDH3P22223 AC023050.3-201ENST00000541142 333 ntBASIC2.48□□□□□ -2.01
CDH3P22223 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH3P22223 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH3P22223 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.48□□□□□ -2.01
CDH3P22223 CTHRC1P1-201ENST00000605383 469 ntBASIC2.48□□□□□ -2.01
CDH3P22223 RNU6-6P-201ENST00000606623 107 ntBASIC2.48□□□□□ -2.01
CDH3P22223 Z82243.1-201ENST00000609432 473 ntBASIC2.48□□□□□ -2.01
CDH3P22223 AL121757.2-201ENST00000611223 313 ntBASIC2.48□□□□□ -2.01
CDH3P22223 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.48□□□□□ -2.01
CDH3P22223 AC090617.10-201ENST00000624308 134 ntBASIC2.48□□□□□ -2.01
CDH3P22223 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
CDH3P22223 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CDH3P22223 RNU6-78P-201ENST00000362897 107 ntBASIC2.47□□□□□ -2.01
CDH3P22223 MIR144-201ENST00000384886 86 ntBASIC2.47□□□□□ -2.01
CDH3P22223 RNA5SP210-201ENST00000391034 120 ntBASIC2.47□□□□□ -2.01
CDH3P22223 RNU4-26P-201ENST00000410270 107 ntBASIC2.47□□□□□ -2.01
CDH3P22223 RNU6-373P-201ENST00000411247 98 ntBASIC2.47□□□□□ -2.01
CDH3P22223 RPL30P16-201ENST00000419341 429 ntBASIC2.47□□□□□ -2.01
CDH3P22223 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.47□□□□□ -2.01
CDH3P22223 TOMM20P4-201ENST00000427861 435 ntBASIC2.47□□□□□ -2.01
CDH3P22223 HMGB1P31-201ENST00000437242 427 ntBASIC2.47□□□□□ -2.01
CDH3P22223 RBMX2P4-201ENST00000441256 376 ntBASIC2.47□□□□□ -2.01
CDH3P22223 GZMAP1-201ENST00000503054 631 ntBASIC2.47□□□□□ -2.01
CDH3P22223 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.47□□□□□ -2.01
CDH3P22223 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.47□□□□□ -2.01
CDH3P22223 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH3P22223 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.47□□□□□ -2.01
CDH3P22223 MIR5692C1-201ENST00000585309 91 ntBASIC2.47□□□□□ -2.01
CDH3P22223 AC008121.1-201ENST00000603244 268 ntBASIC2.47□□□□□ -2.01
CDH3P22223 MIR6895-201ENST00000613497 78 ntBASIC2.47□□□□□ -2.01
CDH3P22223 AC138627.2-201ENST00000624202 601 ntBASIC2.47□□□□□ -2.01
CDH3P22223 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDH3P22223 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDH3P22223 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.46□□□□□ -2.02
CDH3P22223 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.46□□□□□ -2.02
CDH3P22223 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH3P22223 AC138393.1-203ENST00000327086 343 ntBASIC2.46□□□□□ -2.02
CDH3P22223 RNU4-82P-201ENST00000362443 140 ntBASIC2.46□□□□□ -2.02
CDH3P22223 RNU6-1283P-201ENST00000365314 105 ntBASIC2.46□□□□□ -2.02
CDH3P22223 RNU6-748P-201ENST00000384648 107 ntBASIC2.46□□□□□ -2.02
CDH3P22223 SNORA11.2-201ENST00000408318 127 ntBASIC2.46□□□□□ -2.02
CDH3P22223 RNU6-1148P-201ENST00000410992 104 ntBASIC2.46□□□□□ -2.02
CDH3P22223 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH3P22223 SNORD56-201ENST00000413522 71 ntBASIC2.46□□□□□ -2.02
CDH3P22223 IFNA11P-201ENST00000446352 526 ntBASIC2.46□□□□□ -2.02
CDH3P22223 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH3P22223 RPS3P1-201ENST00000456781 192 ntBASIC2.46□□□□□ -2.02
CDH3P22223 RNU7-66P-201ENST00000459469 62 ntBASIC2.46□□□□□ -2.02
CDH3P22223 MED28P2-201ENST00000475771 317 ntBASIC2.46□□□□□ -2.02
CDH3P22223 RPL23AP45-201ENST00000476406 468 ntBASIC2.46□□□□□ -2.02
CDH3P22223 AC079140.5-201ENST00000507882 310 ntBASIC2.46□□□□□ -2.02
CDH3P22223 AC107222.1-201ENST00000510899 637 ntBASIC2.46□□□□□ -2.02
CDH3P22223 AC243972.3-201ENST00000539655 198 ntBASIC2.46□□□□□ -2.02
CDH3P22223 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH3P22223 AC060780.3-201ENST00000589464 80 ntBASIC2.46□□□□□ -2.02
CDH3P22223 AL670379.10-201ENST00000604330 253 ntBASIC2.46□□□□□ -2.02
CDH3P22223 AL670379.9-201ENST00000605428 253 ntBASIC2.46□□□□□ -2.02
CDH3P22223 AC006504.8-201ENST00000621046 635 ntBASIC2.46□□□□□ -2.02
CDH3P22223 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH3P22223 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH3P22223 MTND4P27-201ENST00000450813 1354 ntBASIC2.46□□□□□ -2.02
CDH3P22223 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CDH3P22223 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CDH3P22223 Y_RNA.157-201ENST00000363638 102 ntBASIC2.45□□□□□ -2.02
CDH3P22223 RNU5E-7P-201ENST00000365290 117 ntBASIC2.45□□□□□ -2.02
CDH3P22223 Y_RNA.373-201ENST00000365600 103 ntBASIC2.45□□□□□ -2.02
CDH3P22223 MIR27B-201ENST00000385129 97 ntBASIC2.45□□□□□ -2.02
CDH3P22223 EIF4E2P1-201ENST00000393781 255 ntBASIC2.45□□□□□ -2.02
CDH3P22223 AL513328.1-201ENST00000446460 224 ntBASIC2.45□□□□□ -2.02
CDH3P22223 EEF1B2P7-201ENST00000451177 676 ntBASIC2.45□□□□□ -2.02
CDH3P22223 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.45□□□□□ -2.02
CDH3P22223 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.45□□□□□ -2.02
CDH3P22223 MTCYBP40-201ENST00000509390 1135 ntBASIC2.45□□□□□ -2.02
CDH3P22223 RN7SKP24-201ENST00000515888 284 ntBASIC2.45□□□□□ -2.02
CDH3P22223 SNORA19.2-201ENST00000516013 114 ntBASIC2.45□□□□□ -2.02
CDH3P22223 RNU6-358P-201ENST00000516564 75 ntBASIC2.45□□□□□ -2.02
CDH3P22223 AC069113.1-201ENST00000517763 267 ntBASIC2.45□□□□□ -2.02
CDH3P22223 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.45□□□□□ -2.02
CDH3P22223 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.45□□□□□ -2.02
CDH3P22223 CR383656.8-201ENST00000549046 145 ntBASIC2.45□□□□□ -2.02
CDH3P22223 AL133241.1-201ENST00000556832 487 ntBASIC2.45□□□□□ -2.02
CDH3P22223 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.45□□□□□ -2.02
CDH3P22223 RNU6-85P-201ENST00000605989 107 ntBASIC2.45□□□□□ -2.02
CDH3P22223 FAM157A-202ENST00000615155 405 ntBASIC2.45□□□□□ -2.02
CDH3P22223 U4.3-201ENST00000621047 82 ntBASIC2.45□□□□□ -2.02
CDH3P22223 U4.7-201ENST00000638126 106 ntBASIC2.45□□□□□ -2.02
CDH3P22223 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
CDH3P22223 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms