Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SNORA48.11-201ENST00000517015 89 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.99□□□□□ -2.09
XRCC1P18887 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
XRCC1P18887 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.99□□□□□ -2.09
XRCC1P18887 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.99□□□□□ -2.09
XRCC1P18887 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.99□□□□□ -2.09
XRCC1P18887 AC119751.7-201ENST00000600494 245 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 AC073648.5-201ENST00000603502 305 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 AL713866.2-201ENST00000603579 219 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 AC025449.1-201ENST00000603896 529 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
XRCC1P18887 AC136475.10-201ENST00000620253 385 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 Z69720.2-201ENST00000624755 279 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 AC002543.1-201ENST00000299783 1954 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
XRCC1P18887 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
XRCC1P18887 CENPCP1-201ENST00000533085 2578 ntBASIC1.98□□□□□ -2.09
XRCC1P18887 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.98□□□□□ -2.09
XRCC1P18887 RNU6-78P-201ENST00000362897 107 ntBASIC1.98□□□□□ -2.09
XRCC1P18887 Y_RNA.324-201ENST00000365165 102 ntBASIC1.98□□□□□ -2.09
XRCC1P18887 RNU6-393P-201ENST00000384475 107 ntBASIC1.98□□□□□ -2.09
XRCC1P18887 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
XRCC1P18887 BTF3L4P1-201ENST00000413813 468 ntBASIC1.98□□□□□ -2.09
XRCC1P18887 MTCO2P34-201ENST00000421994 607 ntBASIC1.98□□□□□ -2.09
XRCC1P18887 AC008267.5-201ENST00000424928 265 ntBASIC1.98□□□□□ -2.09
XRCC1P18887 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.98□□□□□ -2.09
XRCC1P18887 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.98□□□□□ -2.09
XRCC1P18887 AC009238.1-201ENST00000442165 424 ntBASIC1.98□□□□□ -2.09
XRCC1P18887 MTCO1P19-201ENST00000443487 500 ntBASIC1.98□□□□□ -2.09
XRCC1P18887 AC009237.6-201ENST00000446969 424 ntBASIC1.98□□□□□ -2.09
XRCC1P18887 snoU13.14-201ENST00000459372 104 ntBASIC1.98□□□□□ -2.09
XRCC1P18887 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.98□□□□□ -2.09
XRCC1P18887 MTCO3P9-201ENST00000506989 781 ntBASIC1.98□□□□□ -2.09
XRCC1P18887 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
XRCC1P18887 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.98□□□□□ -2.09
XRCC1P18887 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.98□□□□□ -2.09
XRCC1P18887 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.98□□□□□ -2.09
XRCC1P18887 AC025165.5-201ENST00000602802 578 ntBASIC1.98□□□□□ -2.09
XRCC1P18887 AC008536.2-201ENST00000607284 349 ntBASIC1.98□□□□□ -2.09
XRCC1P18887 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
XRCC1P18887 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
XRCC1P18887 AC022079.1-201ENST00000621546 602 ntBASIC1.98□□□□□ -2.09
XRCC1P18887 uc_338.20-201ENST00000621563 178 ntBASIC1.98□□□□□ -2.09
XRCC1P18887 AC022418.1-201ENST00000624118 445 ntBASIC1.98□□□□□ -2.09
XRCC1P18887 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.98□□□□□ -2.09
XRCC1P18887 ZNF680P1-201ENST00000436625 1469 ntBASIC1.98□□□□□ -2.09
XRCC1P18887 MTND4P14-201ENST00000435799 1354 ntBASIC1.98□□□□□ -2.09
XRCC1P18887 AP006437.1-201ENST00000641440 3685 ntBASIC1.97□□□□□ -2.09
XRCC1P18887 RNU6-655P-201ENST00000362858 107 ntBASIC1.97□□□□□ -2.09
XRCC1P18887 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
XRCC1P18887 RNU1-148P-201ENST00000384472 162 ntBASIC1.97□□□□□ -2.09
XRCC1P18887 MIR17-201ENST00000385012 84 ntBASIC1.97□□□□□ -2.09
XRCC1P18887 AL139156.1-201ENST00000412785 841 ntBASIC1.97□□□□□ -2.09
XRCC1P18887 CDK8P2-201ENST00000415020 547 ntBASIC1.97□□□□□ -2.09
XRCC1P18887 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.97□□□□□ -2.09
XRCC1P18887 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.97□□□□□ -2.09
XRCC1P18887 AC073464.1-201ENST00000429823 534 ntBASIC1.97□□□□□ -2.09
XRCC1P18887 AL591043.1-201ENST00000432461 424 ntBASIC1.97□□□□□ -2.09
XRCC1P18887 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.97□□□□□ -2.09
XRCC1P18887 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.97□□□□□ -2.09
XRCC1P18887 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.97□□□□□ -2.09
XRCC1P18887 AC068781.1-201ENST00000488231 618 ntBASIC1.97□□□□□ -2.09
XRCC1P18887 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.97□□□□□ -2.09
XRCC1P18887 MTCO3P7-201ENST00000510008 774 ntBASIC1.97□□□□□ -2.09
XRCC1P18887 AC109479.2-201ENST00000517842 174 ntBASIC1.97□□□□□ -2.09
XRCC1P18887 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.97□□□□□ -2.09
XRCC1P18887 AC010620.1-201ENST00000601088 1102 ntBASIC1.97□□□□□ -2.09
XRCC1P18887 AC078795.2-201ENST00000602835 1252 ntBASIC1.97□□□□□ -2.09
XRCC1P18887 AP001596.2-201ENST00000608410 312 ntBASIC1.97□□□□□ -2.09
XRCC1P18887 AL162373.1-201ENST00000620433 407 ntBASIC1.97□□□□□ -2.09
XRCC1P18887 AC090582.1-201ENST00000636321 199 ntBASIC1.97□□□□□ -2.09
XRCC1P18887 U4.7-201ENST00000638126 106 ntBASIC1.97□□□□□ -2.09
XRCC1P18887 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.97□□□□□ -2.09
XRCC1P18887 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
XRCC1P18887 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
XRCC1P18887 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
XRCC1P18887 SNORD56.1-201ENST00000362913 68 ntBASIC1.96□□□□□ -2.1
XRCC1P18887 RNU6-1210P-201ENST00000363775 107 ntBASIC1.96□□□□□ -2.1
XRCC1P18887 RNU2-9P-201ENST00000410194 145 ntBASIC1.96□□□□□ -2.1
XRCC1P18887 AC027124.2-201ENST00000428249 105 ntBASIC1.96□□□□□ -2.1
XRCC1P18887 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.96□□□□□ -2.1
XRCC1P18887 RNA5SP233-201ENST00000459153 113 ntBASIC1.96□□□□□ -2.1
XRCC1P18887 RPS3AP17-201ENST00000472594 777 ntBASIC1.96□□□□□ -2.1
XRCC1P18887 RPL21P99-201ENST00000480369 423 ntBASIC1.96□□□□□ -2.1
XRCC1P18887 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.96□□□□□ -2.1
XRCC1P18887 HMGB1P29-201ENST00000505659 499 ntBASIC1.96□□□□□ -2.1
XRCC1P18887 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.96□□□□□ -2.1
XRCC1P18887 RNU6-586P-201ENST00000517265 104 ntBASIC1.96□□□□□ -2.1
XRCC1P18887 IMMP1LP2-201ENST00000552954 492 ntBASIC1.96□□□□□ -2.1
XRCC1P18887 OR11H5P-201ENST00000554039 926 ntBASIC1.96□□□□□ -2.1
XRCC1P18887 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.96□□□□□ -2.1
XRCC1P18887 MTCO3P23-201ENST00000561363 289 ntBASIC1.96□□□□□ -2.1
XRCC1P18887 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.96□□□□□ -2.1
XRCC1P18887 AC009318.2-201ENST00000610917 651 ntBASIC1.96□□□□□ -2.1
XRCC1P18887 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
XRCC1P18887 Y_RNA.783-201ENST00000613546 102 ntBASIC1.96□□□□□ -2.1
XRCC1P18887 AL161423.1-201ENST00000613700 262 ntBASIC1.96□□□□□ -2.1
XRCC1P18887 YWHAEP7-203ENST00000622054 312 ntBASIC1.96□□□□□ -2.1
XRCC1P18887 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
XRCC1P18887 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms