Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.2□□□□□ -2.22
CTLA4P16410 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.2□□□□□ -2.22
CTLA4P16410 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.2□□□□□ -2.22
CTLA4P16410 AL353752.1-201ENST00000454946 260 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 RPL30P1-201ENST00000488676 339 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 MTCYBP35-201ENST00000503630 1137 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 AC114801.2-201ENST00000503825 781 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 RBBP4P6-201ENST00000508098 202 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.2□□□□□ -2.22
CTLA4P16410 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.2□□□□□ -2.22
CTLA4P16410 AC022878.1-201ENST00000530684 149 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.2□□□□□ -2.22
CTLA4P16410 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.2□□□□□ -2.22
CTLA4P16410 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.2□□□□□ -2.22
CTLA4P16410 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.2□□□□□ -2.22
CTLA4P16410 MIR5692A1-201ENST00000580523 69 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 AC012065.4-201ENST00000602445 679 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 AC004908.3-201ENST00000610248 625 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 MIR7974-201ENST00000615835 79 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 AC027807.2-201ENST00000616099 408 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 RMST_4.1-201ENST00000616886 107 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 MIR7843-201ENST00000622274 79 ntBASIC1.2□□□□□ -2.22
CTLA4P16410 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.2□□□□□ -2.22
CTLA4P16410 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CTLA4P16410 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.2□□□□□ -2.22
CTLA4P16410 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.19□□□□□ -2.22
CTLA4P16410 RNU1-58P-201ENST00000362413 163 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 Y_RNA.22-201ENST00000362492 102 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 SNORD56.1-201ENST00000362913 68 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 RNU5E-5P-201ENST00000365379 116 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 RNU6-641P-201ENST00000384006 107 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 RNU6-203P-201ENST00000384038 104 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 RPL23AP32-201ENST00000395315 459 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 RNU6-387P-201ENST00000411331 105 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.19□□□□□ -2.22
CTLA4P16410 MTND4P20-201ENST00000424125 869 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 CBX3P6-201ENST00000430257 527 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.19□□□□□ -2.22
CTLA4P16410 MTCYBP18-201ENST00000501056 747 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 AC108210.2-201ENST00000503681 201 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 MTCO3P9-201ENST00000506989 781 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 MTCYBP40-201ENST00000509390 1135 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 RNU1-86P-201ENST00000516108 154 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 Y_RNA.672-201ENST00000516289 104 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 RNU1-107P-201ENST00000516617 154 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.19□□□□□ -2.22
CTLA4P16410 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.19□□□□□ -2.22
CTLA4P16410 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.19□□□□□ -2.22
CTLA4P16410 AC015712.3-201ENST00000559380 164 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 AC068338.1-201ENST00000565567 176 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.19□□□□□ -2.22
CTLA4P16410 HMGN1P30-201ENST00000589286 268 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 CYP2C61P-201ENST00000604072 290 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 AL136363.2-201ENST00000604173 851 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 AC112191.3-201ENST00000604371 277 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 AC025754.2-201ENST00000606491 432 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 AC026585.1-201ENST00000619582 524 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 AC022960.3-201ENST00000619794 441 ntBASIC1.19□□□□□ -2.22
CTLA4P16410 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CTLA4P16410 U8.10-201ENST00000384260 133 ntBASIC1.18□□□□□ -2.22
CTLA4P16410 RNU2-8P-201ENST00000410727 190 ntBASIC1.18□□□□□ -2.22
CTLA4P16410 RNA5SP111-201ENST00000411386 101 ntBASIC1.18□□□□□ -2.22
CTLA4P16410 RPL21P90-201ENST00000415692 466 ntBASIC1.18□□□□□ -2.22
CTLA4P16410 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.18□□□□□ -2.22
CTLA4P16410 AC007969.2-201ENST00000441891 191 ntBASIC1.18□□□□□ -2.22
CTLA4P16410 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.18□□□□□ -2.22
CTLA4P16410 USP9YP12-201ENST00000450481 570 ntBASIC1.18□□□□□ -2.22
CTLA4P16410 RPS29P29-201ENST00000456396 171 ntBASIC1.18□□□□□ -2.22
CTLA4P16410 RPL30P6-201ENST00000475925 342 ntBASIC1.18□□□□□ -2.22
CTLA4P16410 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.18□□□□□ -2.22
CTLA4P16410 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.18□□□□□ -2.22
CTLA4P16410 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.18□□□□□ -2.22
CTLA4P16410 RNU6-685P-201ENST00000517088 95 ntBASIC1.18□□□□□ -2.22
CTLA4P16410 AP005660.1-201ENST00000522972 293 ntBASIC1.18□□□□□ -2.22
CTLA4P16410 AC022616.3-201ENST00000523940 148 ntBASIC1.18□□□□□ -2.22
CTLA4P16410 AP003033.1-201ENST00000527244 415 ntBASIC1.18□□□□□ -2.22
CTLA4P16410 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
CTLA4P16410 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.18□□□□□ -2.22
CTLA4P16410 AL161670.1-201ENST00000554348 137 ntBASIC1.18□□□□□ -2.22
CTLA4P16410 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.18□□□□□ -2.22
CTLA4P16410 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.18□□□□□ -2.22
CTLA4P16410 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.18□□□□□ -2.22
CTLA4P16410 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.18□□□□□ -2.22
CTLA4P16410 AL022345.1-201ENST00000607292 135 ntBASIC1.18□□□□□ -2.22
CTLA4P16410 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.18□□□□□ -2.22
CTLA4P16410 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.18□□□□□ -2.22
CTLA4P16410 AC099654.13-201ENST00000639774 207 ntBASIC1.18□□□□□ -2.22
CTLA4P16410 ZNF209P-201ENST00000593450 2304 ntBASIC1.18□□□□□ -2.22
CTLA4P16410 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CTLA4P16410 snoU2_19.1-201ENST00000362361 80 ntBASIC1.17□□□□□ -2.22
CTLA4P16410 RNU6-78P-201ENST00000362897 107 ntBASIC1.17□□□□□ -2.22
CTLA4P16410 Y_RNA.99-201ENST00000363138 105 ntBASIC1.17□□□□□ -2.22
CTLA4P16410 RNY1P12-201ENST00000364251 105 ntBASIC1.17□□□□□ -2.22
CTLA4P16410 AL356583.2-201ENST00000426536 280 ntBASIC1.17□□□□□ -2.22
CTLA4P16410 RPS15AP10-201ENST00000432472 382 ntBASIC1.17□□□□□ -2.22
CTLA4P16410 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.17□□□□□ -2.22
CTLA4P16410 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.17□□□□□ -2.22
CTLA4P16410 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 320.3 ms