Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 SNORA23-201ENST00000365128 182 ntBASIC3.37□□□□□ -1.87
COL11A2P13942 Y_RNA.376-201ENST00000365638 108 ntBASIC3.37□□□□□ -1.87
COL11A2P13942 RNU6-933P-201ENST00000384424 107 ntBASIC3.37□□□□□ -1.87
COL11A2P13942 AL591034.2-201ENST00000402839 359 ntBASIC3.37□□□□□ -1.87
COL11A2P13942 RNA5SP56-201ENST00000410277 118 ntBASIC3.37□□□□□ -1.87
COL11A2P13942 RNU6-712P-201ENST00000410558 100 ntBASIC3.37□□□□□ -1.87
COL11A2P13942 RNU7-169P-201ENST00000459456 61 ntBASIC3.37□□□□□ -1.87
COL11A2P13942 MTND1P19-201ENST00000511780 315 ntBASIC3.37□□□□□ -1.87
COL11A2P13942 ACA59.1-201ENST00000515966 143 ntBASIC3.37□□□□□ -1.87
COL11A2P13942 RNU6-237P-201ENST00000515985 71 ntBASIC3.37□□□□□ -1.87
COL11A2P13942 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.37□□□□□ -1.87
COL11A2P13942 LRRC37A5P-203ENST00000580181 585 ntBASIC3.37□□□□□ -1.87
COL11A2P13942 MIR5188-201ENST00000583467 113 ntBASIC3.37□□□□□ -1.87
COL11A2P13942 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL11A2P13942 AC008725.1-201ENST00000605123 2263 ntBASIC3.37□□□□□ -1.87
COL11A2P13942 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COL11A2P13942 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
COL11A2P13942 Y_RNA.483-201ENST00000384380 101 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 SNORA69.1-201ENST00000390904 137 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 RNU2-43P-201ENST00000410306 190 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 AC092809.3-201ENST00000415453 231 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.36□□□□□ -1.87
COL11A2P13942 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL11A2P13942 AC090774.1-201ENST00000435925 246 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.36□□□□□ -1.87
COL11A2P13942 snoU13.26-201ENST00000459452 105 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 UBL5P3-201ENST00000475112 231 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 RN7SL633P-201ENST00000488974 297 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.36□□□□□ -1.87
COL11A2P13942 GZMAP1-201ENST00000503054 631 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 RNU6-1023P-201ENST00000516137 106 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 SNORA31.22-201ENST00000517204 135 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 AP003385.6-201ENST00000531603 374 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.36□□□□□ -1.87
COL11A2P13942 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.36□□□□□ -1.87
COL11A2P13942 AC012669.1-201ENST00000603209 283 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 AL031601.2-202ENST00000622650 282 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL11A2P13942 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL11A2P13942 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
COL11A2P13942 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.36□□□□□ -1.87
COL11A2P13942 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL11A2P13942 RNU6-1155P-201ENST00000363554 107 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 RNU6-1317P-201ENST00000364582 104 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 RNU6-1062P-201ENST00000383908 107 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 MIR764-201ENST00000390811 85 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 AL353621.1-201ENST00000418219 243 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL11A2P13942 TOMM20P4-201ENST00000427861 435 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 DAP3P1-201ENST00000441522 278 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL11A2P13942 RNU6-1037P-201ENST00000459571 107 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 AC133134.1-201ENST00000466800 359 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 RN7SL330P-201ENST00000469709 307 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 FO393415.2-201ENST00000480085 343 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.36□□□□□ -1.87
COL11A2P13942 OR1M4P-201ENST00000589199 287 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 AC008962.1-201ENST00000605729 304 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.36□□□□□ -1.87
COL11A2P13942 AL512643.1-201ENST00000635735 524 ntBASIC3.36□□□□□ -1.87
COL11A2P13942 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL11A2P13942 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL11A2P13942 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.35□□□□□ -1.87
COL11A2P13942 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL11A2P13942 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
COL11A2P13942 ZNF72P-201ENST00000425869 1908 ntBASIC3.35□□□□□ -1.87
COL11A2P13942 Y_RNA.106-201ENST00000363189 100 ntBASIC3.35□□□□□ -1.87
COL11A2P13942 RNU4-50P-201ENST00000364361 141 ntBASIC3.35□□□□□ -1.87
COL11A2P13942 RNU6-611P-201ENST00000384276 104 ntBASIC3.35□□□□□ -1.87
COL11A2P13942 AC007098.1-201ENST00000420122 367 ntBASIC3.35□□□□□ -1.87
COL11A2P13942 RPS15AP6-201ENST00000420703 385 ntBASIC3.35□□□□□ -1.87
COL11A2P13942 AL590135.1-201ENST00000422215 156 ntBASIC3.35□□□□□ -1.87
COL11A2P13942 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.35□□□□□ -1.87
COL11A2P13942 AL121871.1-201ENST00000443413 436 ntBASIC3.35□□□□□ -1.87
COL11A2P13942 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.35□□□□□ -1.87
COL11A2P13942 snoU13.3-201ENST00000459441 104 ntBASIC3.35□□□□□ -1.87
COL11A2P13942 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.35□□□□□ -1.87
COL11A2P13942 AC078817.1-201ENST00000492623 435 ntBASIC3.35□□□□□ -1.87
COL11A2P13942 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.35□□□□□ -1.87
COL11A2P13942 AP003733.2-201ENST00000529409 171 ntBASIC3.35□□□□□ -1.87
COL11A2P13942 AC009163.5-201ENST00000575421 637 ntBASIC3.35□□□□□ -1.87
COL11A2P13942 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
COL11A2P13942 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
COL11A2P13942 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
COL11A2P13942 SNORA36C-201ENST00000384289 132 ntBASIC3.34□□□□□ -1.87
COL11A2P13942 RNU4-78P-201ENST00000410940 126 ntBASIC3.34□□□□□ -1.87
COL11A2P13942 RN7SKP192-201ENST00000411291 327 ntBASIC3.34□□□□□ -1.87
COL11A2P13942 RPL21P38-201ENST00000418090 167 ntBASIC3.34□□□□□ -1.87
COL11A2P13942 AL137014.1-201ENST00000420490 1226 ntBASIC3.34□□□□□ -1.87
COL11A2P13942 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.34□□□□□ -1.87
COL11A2P13942 AL353997.1-201ENST00000432936 108 ntBASIC3.34□□□□□ -1.87
COL11A2P13942 MTND4LP30-201ENST00000454092 297 ntBASIC3.34□□□□□ -1.87
COL11A2P13942 SNRPGP5-201ENST00000456003 220 ntBASIC3.34□□□□□ -1.87
COL11A2P13942 RPL39P38-201ENST00000467018 153 ntBASIC3.34□□□□□ -1.87
COL11A2P13942 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.34□□□□□ -1.87
COL11A2P13942 AC105758.1-201ENST00000506038 399 ntBASIC3.34□□□□□ -1.87
COL11A2P13942 RNU6-570P-201ENST00000517051 105 ntBASIC3.34□□□□□ -1.87
COL11A2P13942 CBX3P8-201ENST00000532412 525 ntBASIC3.34□□□□□ -1.87
COL11A2P13942 AC109446.1-201ENST00000566172 220 ntBASIC3.34□□□□□ -1.87
COL11A2P13942 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms