Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXD8P13378 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXD8P13378 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXD8P13378 RNU6-942P-201ENST00000363002 107 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 RNU6-81P-201ENST00000365608 104 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 Y_RNA.435-201ENST00000384095 112 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 RNU6-1145P-201ENST00000384246 107 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 MIR708-201ENST00000390708 88 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 RNU6-1197P-201ENST00000391183 107 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 RPL21P17-201ENST00000397467 475 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 U3.39-201ENST00000408569 239 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 RNU6-1135P-201ENST00000411083 103 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 RPL26P27-201ENST00000414397 437 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 AC010095.1-201ENST00000443543 144 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 MTATP6P7-201ENST00000453315 681 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 RPS4XP22-201ENST00000480755 780 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 SNORA74D-201ENST00000516404 141 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 RNU6-62P-201ENST00000516526 102 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXD8P13378 CYP4A43P-201ENST00000568156 121 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXD8P13378 MIR5187-201ENST00000583479 76 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 AC010999.1-201ENST00000611856 324 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 SNORA43.4-201ENST00000629559 138 ntBASIC4.34□□□□□ -1.71
HOXD8P13378 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
HOXD8P13378 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXD8P13378 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.34□□□□□ -1.72
HOXD8P13378 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HOXD8P13378 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
HOXD8P13378 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HOXD8P13378 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HOXD8P13378 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HOXD8P13378 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD8P13378 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD8P13378 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXD8P13378 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD8P13378 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD8P13378 RNU5F-3P-201ENST00000363767 117 ntBASIC4.33□□□□□ -1.72
HOXD8P13378 MIR518D-201ENST00000385014 87 ntBASIC4.33□□□□□ -1.72
HOXD8P13378 AL357139.1-201ENST00000407792 426 ntBASIC4.33□□□□□ -1.72
HOXD8P13378 AL160275.2-201ENST00000412010 394 ntBASIC4.33□□□□□ -1.72
HOXD8P13378 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXD8P13378 BMS1P22-201ENST00000414726 313 ntBASIC4.33□□□□□ -1.72
HOXD8P13378 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXD8P13378 AL358075.3-201ENST00000426289 226 ntBASIC4.33□□□□□ -1.72
HOXD8P13378 RPL23AP95-201ENST00000426806 265 ntBASIC4.33□□□□□ -1.72
HOXD8P13378 AC125238.1-201ENST00000448842 249 ntBASIC4.33□□□□□ -1.72
HOXD8P13378 NDUFS5P3-201ENST00000450668 321 ntBASIC4.33□□□□□ -1.72
HOXD8P13378 RNU6-625P-201ENST00000459412 107 ntBASIC4.33□□□□□ -1.72
HOXD8P13378 RPS26P28-201ENST00000470806 348 ntBASIC4.33□□□□□ -1.72
HOXD8P13378 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXD8P13378 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXD8P13378 AC074133.1-201ENST00000515696 183 ntBASIC4.33□□□□□ -1.72
HOXD8P13378 RNU1-30P-201ENST00000606575 163 ntBASIC4.33□□□□□ -1.72
HOXD8P13378 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXD8P13378 AL359198.2-201ENST00000611836 194 ntBASIC4.33□□□□□ -1.72
HOXD8P13378 AC084757.4-201ENST00000616350 526 ntBASIC4.33□□□□□ -1.72
HOXD8P13378 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD8P13378 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
HOXD8P13378 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.33□□□□□ -1.72
HOXD8P13378 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
HOXD8P13378 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD8P13378 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXD8P13378 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXD8P13378 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD8P13378 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD8P13378 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXD8P13378 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXD8P13378 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD8P13378 AC068254.2-201ENST00000623938 3577 ntBASIC4.32□□□□□ -1.72
HOXD8P13378 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXD8P13378 RNU6-873P-201ENST00000363833 107 ntBASIC4.32□□□□□ -1.72
HOXD8P13378 SNORA36A-201ENST00000384221 132 ntBASIC4.32□□□□□ -1.72
HOXD8P13378 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HOXD8P13378 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXD8P13378 HMGB1P37-201ENST00000439613 609 ntBASIC4.32□□□□□ -1.72
HOXD8P13378 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD8P13378 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD8P13378 AC097462.2-201ENST00000504623 481 ntBASIC4.32□□□□□ -1.72
HOXD8P13378 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.32□□□□□ -1.72
HOXD8P13378 MTND6P33-201ENST00000571794 183 ntBASIC4.32□□□□□ -1.72
HOXD8P13378 FTX_3.1-201ENST00000610451 147 ntBASIC4.32□□□□□ -1.72
HOXD8P13378 AL136964.1-201ENST00000622038 2990 ntBASIC4.32□□□□□ -1.72
HOXD8P13378 AC009093.8-201ENST00000641769 292 ntBASIC4.32□□□□□ -1.72
HOXD8P13378 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HOXD8P13378 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXD8P13378 AC092593.1-201ENST00000515413 1815 ntBASIC4.32□□□□□ -1.72
HOXD8P13378 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXD8P13378 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HOXD8P13378 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXD8P13378 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXD8P13378 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.31□□□□□ -1.72
HOXD8P13378 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD8P13378 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD8P13378 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD8P13378 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD8P13378 RNU4-80P-201ENST00000363200 141 ntBASIC4.31□□□□□ -1.72
HOXD8P13378 RNU1-100P-201ENST00000365255 165 ntBASIC4.31□□□□□ -1.72
HOXD8P13378 RNU1-73P-201ENST00000383971 164 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms