Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC007785.2-201ENST00000598627 1916 ntBASIC3.48□□□□□ -1.85
HLA-DOAP06340 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DOAP06340 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DOAP06340 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DOAP06340 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DOAP06340 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DOAP06340 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DOAP06340 RPL9P7-201ENST00000330965 580 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 RNU6-50P-201ENST00000362356 103 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 Y_RNA.26-201ENST00000362539 101 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 Y_RNA.39-201ENST00000362620 98 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 RNY1P16-201ENST00000363063 111 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 RNU4-42P-201ENST00000364738 142 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 RNU6-741P-201ENST00000383889 107 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HLA-DOAP06340 RNU6-1197P-201ENST00000391183 107 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 RNU6-1109P-201ENST00000391187 107 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 AL513475.1-201ENST00000406602 315 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 NUP35P1-201ENST00000422734 947 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DOAP06340 RPS6P12-201ENST00000432491 726 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DOAP06340 AL513043.1-201ENST00000439124 535 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 HIGD1AP2-201ENST00000446367 280 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DOAP06340 RPL9P9-202ENST00000466501 579 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 RPL23AP45-201ENST00000476406 468 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DOAP06340 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DOAP06340 RNA5SP356-201ENST00000515972 94 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 RNU6-307P-201ENST00000516743 106 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DOAP06340 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DOAP06340 ATP5F1P5-201ENST00000526403 760 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 AC023442.1-201ENST00000531247 422 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DOAP06340 TRAV28-201ENST00000557548 323 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DOAP06340 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DOAP06340 MIR3668-201ENST00000582138 75 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 MIR5188-201ENST00000583467 113 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 AC004825.2-201ENST00000616634 455 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 AC090617.7-201ENST00000623952 126 ntBASIC3.47□□□□□ -1.85
HLA-DOAP06340 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DOAP06340 AC008725.1-201ENST00000605123 2263 ntBASIC3.46□□□□□ -1.85
HLA-DOAP06340 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
HLA-DOAP06340 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DOAP06340 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DOAP06340 U8.8-201ENST00000365399 135 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DOAP06340 Y_RNA.396-201ENST00000383949 103 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 MIR10A-201ENST00000385043 110 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 MIR1302-3-201ENST00000408128 138 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 RNA5SP239-201ENST00000410218 129 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 RNU2-71P-201ENST00000411395 189 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 AL096701.2-201ENST00000416920 238 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 AL590383.1-201ENST00000428602 75 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 RPS15AP10-201ENST00000432472 382 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 AC105272.1-201ENST00000438604 198 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 AC099799.1-201ENST00000439809 192 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 DAP3P1-201ENST00000441522 278 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 DYNLT3P2-201ENST00000442517 295 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 snoU109.2-201ENST00000459316 135 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 RPL22P13-201ENST00000493291 347 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DOAP06340 RNU6-1271P-201ENST00000517049 105 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 RNA5SP291-201ENST00000517222 105 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DOAP06340 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DOAP06340 MIR4644-201ENST00000579929 84 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 MIR4513-201ENST00000581077 86 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 AC009314.1-201ENST00000603871 304 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DOAP06340 HMGB1P24-202ENST00000615653 685 ntBASIC3.46□□□□□ -1.86
HLA-DOAP06340 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DOAP06340 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HLA-DOAP06340 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DOAP06340 AC116096.1-201ENST00000566804 2314 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
HLA-DOAP06340 AC008669.1-201ENST00000565823 2178 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DOAP06340 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DOAP06340 RNU6-428P-201ENST00000362942 107 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 Y_RNA.188-201ENST00000363952 111 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 Y_RNA.222-201ENST00000364264 102 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 RNU6-596P-201ENST00000365395 98 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 Y_RNA.424-201ENST00000384063 103 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 MIR521-1-201ENST00000384902 87 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 Y_RNA.623-201ENST00000411128 95 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 AL139281.1-201ENST00000422120 335 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 AC007560.1-201ENST00000426912 237 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DOAP06340 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DOAP06340 RN7SL442P-201ENST00000473804 320 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 RN7SL633P-201ENST00000488974 297 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DOAP06340 ACA59.1-201ENST00000515966 143 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 Y_RNA.687-201ENST00000516558 91 ntBASIC3.45□□□□□ -1.86
HLA-DOAP06340 RNU6-572P-201ENST00000516724 80 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms