Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AC063943.3-201ENST00000615562 356 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 AC108479.2-201ENST00000617314 601 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 AC011155.2-201ENST00000623202 216 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 AC097372.5-201ENST00000623665 376 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 AC007494.3-201ENST00000624660 743 ntBASIC1.42□□□□□ -2.18
MT-ND4P03905 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.42□□□□□ -2.18
MT-ND4P03905 MTND5P17-201ENST00000418405 1603 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.41□□□□□ -2.18
MT-ND4P03905 SNORA62.1-201ENST00000364287 154 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 RNU5E-7P-201ENST00000365290 117 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 RNU6-45P-201ENST00000384471 107 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 SNORA40.3-201ENST00000390964 122 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 RNU6-550P-201ENST00000391057 101 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 MIR934-201ENST00000401241 83 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 MTND3P17-201ENST00000416968 344 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.41□□□□□ -2.18
MT-ND4P03905 MTND2P9-201ENST00000422293 931 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.41□□□□□ -2.18
MT-ND4P03905 MTND2P29-201ENST00000438595 412 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.41□□□□□ -2.18
MT-ND4P03905 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.41□□□□□ -2.18
MT-ND4P03905 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.41□□□□□ -2.18
MT-ND4P03905 AL360221.1-201ENST00000445989 335 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 FDX1P2-201ENST00000450769 375 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 AL133217.1-201ENST00000450980 425 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 SNRPFP4-201ENST00000456366 242 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 AL122001.1-201ENST00000457027 370 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.41□□□□□ -2.18
MT-ND4P03905 SNORA59A-201ENST00000459326 152 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.41□□□□□ -2.18
MT-ND4P03905 PTP4A1P4-201ENST00000512479 322 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 AC117532.1-201ENST00000514638 323 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 RNU6-410P-201ENST00000517006 107 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.41□□□□□ -2.18
MT-ND4P03905 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.41□□□□□ -2.18
MT-ND4P03905 DUXAP5-201ENST00000529668 529 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 AC018630.3-201ENST00000542637 96 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.41□□□□□ -2.18
MT-ND4P03905 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.41□□□□□ -2.18
MT-ND4P03905 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.41□□□□□ -2.18
MT-ND4P03905 MIR4760-201ENST00000585040 80 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.41□□□□□ -2.18
MT-ND4P03905 AL136363.2-201ENST00000604173 851 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 AC091834.1-201ENST00000614543 472 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 AC084768.2-201ENST00000622736 221 ntBASIC1.41□□□□□ -2.18
MT-ND4P03905 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.41□□□□□ -2.18
MT-ND4P03905 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.41□□□□□ -2.18
MT-ND4P03905 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.41□□□□□ -2.18
MT-ND4P03905 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
MT-ND4P03905 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
MT-ND4P03905 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
MT-ND4P03905 RNU4-21P-201ENST00000362802 126 ntBASIC1.4□□□□□ -2.19
MT-ND4P03905 RNU6-743P-201ENST00000364151 106 ntBASIC1.4□□□□□ -2.19
MT-ND4P03905 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
MT-ND4P03905 RNU6-74P-201ENST00000384235 107 ntBASIC1.4□□□□□ -2.19
MT-ND4P03905 SNORD14D-201ENST00000384390 87 ntBASIC1.4□□□□□ -2.19
MT-ND4P03905 MIR29B2-201ENST00000385055 81 ntBASIC1.4□□□□□ -2.19
MT-ND4P03905 Y_RNA.597-201ENST00000410463 100 ntBASIC1.4□□□□□ -2.19
MT-ND4P03905 RPL31P35-201ENST00000431058 377 ntBASIC1.4□□□□□ -2.19
MT-ND4P03905 RPS15AP10-201ENST00000432472 382 ntBASIC1.4□□□□□ -2.19
MT-ND4P03905 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
MT-ND4P03905 AL162395.1-201ENST00000457882 422 ntBASIC1.4□□□□□ -2.19
MT-ND4P03905 AC021146.2-201ENST00000504736 556 ntBASIC1.4□□□□□ -2.19
MT-ND4P03905 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.4□□□□□ -2.19
MT-ND4P03905 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.4□□□□□ -2.19
MT-ND4P03905 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.4□□□□□ -2.19
MT-ND4P03905 MTATP6P24-201ENST00000576835 677 ntBASIC1.4□□□□□ -2.19
MT-ND4P03905 MIR3682-201ENST00000581338 84 ntBASIC1.4□□□□□ -2.19
MT-ND4P03905 AC091135.1-201ENST00000585943 307 ntBASIC1.4□□□□□ -2.19
MT-ND4P03905 Z69720.2-201ENST00000624755 279 ntBASIC1.4□□□□□ -2.19
MT-ND4P03905 U6.114-201ENST00000636407 96 ntBASIC1.4□□□□□ -2.19
MT-ND4P03905 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
MT-ND4P03905 MTND5P10-201ENST00000603719 1809 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 RNU6-1287P-201ENST00000362914 107 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 RNU6-527P-201ENST00000363425 104 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 RNU6-1164P-201ENST00000364428 107 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 RNU6-1303P-201ENST00000364841 107 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 RNA5SP126-201ENST00000365092 109 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 RNU6-297P-201ENST00000384636 107 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 RNU6-1060P-201ENST00000384664 107 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 MIR544A-201ENST00000384855 91 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 MIR1-2-201ENST00000384961 85 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 MIR597-201ENST00000384968 97 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 MIR29C-201ENST00000385231 88 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 U8.13-201ENST00000390842 128 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 AL365203.2-201ENST00000423444 196 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
MT-ND4P03905 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.39□□□□□ -2.19
MT-ND4P03905 AL669831.1-202ENST00000428504 417 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.39□□□□□ -2.19
MT-ND4P03905 GPR143P-201ENST00000434155 205 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 GTF2IP13-201ENST00000438487 386 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 KATNBL1P3-201ENST00000443475 909 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.39□□□□□ -2.19
MT-ND4P03905 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.39□□□□□ -2.19
MT-ND4P03905 AL033528.1-201ENST00000453780 140 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.39□□□□□ -2.19
MT-ND4P03905 AC104564.1-201ENST00000493028 407 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 RPL23AP63-201ENST00000498752 471 ntBASIC1.39□□□□□ -2.19
MT-ND4P03905 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms