Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MIR3200-201ENST00000580767 85 ntBASIC2.22□□□□□ -2.05
MT-ND1P03886 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.22□□□□□ -2.05
MT-ND1P03886 AL033523.1-201ENST00000605153 153 ntBASIC2.22□□□□□ -2.05
MT-ND1P03886 AC005000.2-201ENST00000605468 310 ntBASIC2.22□□□□□ -2.05
MT-ND1P03886 Z82243.1-201ENST00000609432 473 ntBASIC2.22□□□□□ -2.05
MT-ND1P03886 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.22□□□□□ -2.05
MT-ND1P03886 AL121757.2-201ENST00000611223 313 ntBASIC2.22□□□□□ -2.05
MT-ND1P03886 AC090617.10-201ENST00000624308 134 ntBASIC2.22□□□□□ -2.05
MT-ND1P03886 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
MT-ND1P03886 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
MT-ND1P03886 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
MT-ND1P03886 Z75746.1-201ENST00000440243 2080 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 AC138393.1-203ENST00000327086 343 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 Y_RNA.373-201ENST00000365600 103 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 FTH1P15-201ENST00000406984 280 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 AC096664.2-201ENST00000411843 406 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.21□□□□□ -2.06
MT-ND1P03886 AC097463.2-201ENST00000421074 142 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 EIF4EP4-201ENST00000424916 578 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.21□□□□□ -2.06
MT-ND1P03886 HMGB1P31-201ENST00000437242 427 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 IFNA11P-201ENST00000446352 526 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 HIGD1AP2-201ENST00000446367 280 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.21□□□□□ -2.06
MT-ND1P03886 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.21□□□□□ -2.06
MT-ND1P03886 AC018437.1-201ENST00000492214 406 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.21□□□□□ -2.06
MT-ND1P03886 SNORA14.1-201ENST00000516113 141 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 RNU6-358P-201ENST00000516564 75 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.21□□□□□ -2.06
MT-ND1P03886 RPL7P20-201ENST00000520308 745 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.21□□□□□ -2.06
MT-ND1P03886 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.21□□□□□ -2.06
MT-ND1P03886 APOOP1-201ENST00000604695 592 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 SNORD14A-201ENST00000606526 91 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 AC067747.1-201ENST00000608026 250 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 MIR7106-201ENST00000612419 65 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.21□□□□□ -2.06
MT-ND1P03886 RMST_7.1-201ENST00000621935 268 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 Z69720.2-201ENST00000624755 279 ntBASIC2.21□□□□□ -2.06
MT-ND1P03886 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
MT-ND1P03886 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
MT-ND1P03886 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
MT-ND1P03886 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
MT-ND1P03886 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 AC062016.1-201ENST00000355719 319 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RNU6-37P-201ENST00000362692 107 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RNU6-11P-201ENST00000364234 107 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RNU6-25P-201ENST00000383873 107 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RNU6-1-201ENST00000383898 107 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RNU6-48P-201ENST00000384161 107 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RNU6-36P-201ENST00000384172 107 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RNU6-4P-201ENST00000384205 107 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RNU6-5P-201ENST00000384238 107 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RNU6-3P-201ENST00000384314 107 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 Y_RNA.480-201ENST00000384364 102 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RNU6-16P-201ENST00000384385 107 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RNU6-15P-201ENST00000384534 107 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RNU6-2-201ENST00000384627 107 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RNU6-29P-201ENST00000384637 107 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RNU6-9-201ENST00000384776 107 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RNU6-33P-201ENST00000384793 107 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 MIR144-201ENST00000384886 86 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RNU2-63P-201ENST00000410792 194 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 WARS2P1-201ENST00000429678 537 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.2□□□□□ -2.06
MT-ND1P03886 AC025750.2-201ENST00000442609 450 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RNU7-66P-201ENST00000459469 62 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RNU6-1069P-201ENST00000516612 133 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 AC009127.3-201ENST00000570531 403 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 LARP7P3-201ENST00000579888 337 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RPS15AP11-201ENST00000594193 385 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 RNU6-6P-201ENST00000606623 107 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 U4atac.1-201ENST00000618345 95 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 AC006504.8-201ENST00000621046 635 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 AC006386.2-201ENST00000624491 75 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 AC012005.1-201ENST00000624575 75 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 AC100810.6-201ENST00000638068 285 ntBASIC2.2□□□□□ -2.06
MT-ND1P03886 AC007336.1-201ENST00000576365 3828 ntBASIC2.19□□□□□ -2.06
MT-ND1P03886 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
MT-ND1P03886 SNORD114-30-201ENST00000364448 72 ntBASIC2.19□□□□□ -2.06
MT-ND1P03886 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
MT-ND1P03886 MIR196B-201ENST00000384852 84 ntBASIC2.19□□□□□ -2.06
MT-ND1P03886 AL359511.1-201ENST00000402970 211 ntBASIC2.19□□□□□ -2.06
MT-ND1P03886 RNU4-26P-201ENST00000410270 107 ntBASIC2.19□□□□□ -2.06
MT-ND1P03886 RNA5SP184-201ENST00000411071 108 ntBASIC2.19□□□□□ -2.06
MT-ND1P03886 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.19□□□□□ -2.06
MT-ND1P03886 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.19□□□□□ -2.06
MT-ND1P03886 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.19□□□□□ -2.06
MT-ND1P03886 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.19□□□□□ -2.06
MT-ND1P03886 AC124916.1-201ENST00000444020 547 ntBASIC2.19□□□□□ -2.06
MT-ND1P03886 RPL7P12-201ENST00000446719 750 ntBASIC2.19□□□□□ -2.06
MT-ND1P03886 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.19□□□□□ -2.06
MT-ND1P03886 AC008526.1-201ENST00000509149 338 ntBASIC2.19□□□□□ -2.06
MT-ND1P03886 FAM206BP-201ENST00000510179 541 ntBASIC2.19□□□□□ -2.06
MT-ND1P03886 SMURF2P1-201ENST00000514992 481 ntBASIC2.19□□□□□ -2.06
MT-ND1P03886 AF235103.2-201ENST00000525753 346 ntBASIC2.19□□□□□ -2.06
MT-ND1P03886 AP000889.2-201ENST00000532684 490 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms