Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNU6-985P-201ENST00000410182 104 ntBASIC2.57□□□□□ -2
COL2A1P02458 HMGB3P2-201ENST00000411913 584 ntBASIC2.57□□□□□ -2
COL2A1P02458 AL590632.1-201ENST00000424289 371 ntBASIC2.57□□□□□ -2
COL2A1P02458 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.57□□□□□ -2
COL2A1P02458 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.57□□□□□ -2
COL2A1P02458 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.57□□□□□ -2
COL2A1P02458 RNU7-152P-201ENST00000458982 64 ntBASIC2.57□□□□□ -2
COL2A1P02458 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.57□□□□□ -2
COL2A1P02458 MTCO1P29-201ENST00000496868 288 ntBASIC2.57□□□□□ -2
COL2A1P02458 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.57□□□□□ -2
COL2A1P02458 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.57□□□□□ -2
COL2A1P02458 SETP2-201ENST00000553886 926 ntBASIC2.57□□□□□ -2
COL2A1P02458 AL117187.1-201ENST00000555482 181 ntBASIC2.57□□□□□ -2
COL2A1P02458 AL133153.1-201ENST00000557756 303 ntBASIC2.57□□□□□ -2
COL2A1P02458 AL022345.1-201ENST00000607292 135 ntBASIC2.57□□□□□ -2
COL2A1P02458 AL596245.1-201ENST00000618994 362 ntBASIC2.57□□□□□ -2
COL2A1P02458 uc_338.11-201ENST00000619132 160 ntBASIC2.57□□□□□ -2
COL2A1P02458 AL162373.1-201ENST00000620433 407 ntBASIC2.57□□□□□ -2
COL2A1P02458 AC091925.2-201ENST00000625059 256 ntBASIC2.57□□□□□ -2
COL2A1P02458 API5P2-201ENST00000397055 1498 ntBASIC2.56□□□□□ -2
COL2A1P02458 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
COL2A1P02458 RNU6-511P-201ENST00000363496 107 ntBASIC2.56□□□□□ -2
COL2A1P02458 Y_RNA.212-201ENST00000364177 102 ntBASIC2.56□□□□□ -2
COL2A1P02458 RNU6-61P-201ENST00000365528 109 ntBASIC2.56□□□□□ -2
COL2A1P02458 SNORD116-11-201ENST00000383882 92 ntBASIC2.56□□□□□ -2
COL2A1P02458 Y_RNA.404-201ENST00000383978 102 ntBASIC2.56□□□□□ -2
COL2A1P02458 Y_RNA.540-201ENST00000384638 111 ntBASIC2.56□□□□□ -2
COL2A1P02458 MRPL42P3-201ENST00000401492 326 ntBASIC2.56□□□□□ -2
COL2A1P02458 AL023284.1-201ENST00000403956 276 ntBASIC2.56□□□□□ -2
COL2A1P02458 SNORA11.4-201ENST00000408823 129 ntBASIC2.56□□□□□ -2
COL2A1P02458 RN7SKP158-201ENST00000410453 326 ntBASIC2.56□□□□□ -2
COL2A1P02458 POLHP1-201ENST00000411806 470 ntBASIC2.56□□□□□ -2
COL2A1P02458 RPL7P46-201ENST00000425129 740 ntBASIC2.56□□□□□ -2
COL2A1P02458 MED13P1-201ENST00000428342 171 ntBASIC2.56□□□□□ -2
COL2A1P02458 AL669831.1-202ENST00000428504 417 ntBASIC2.56□□□□□ -2
COL2A1P02458 AC096644.2-201ENST00000429278 159 ntBASIC2.56□□□□□ -2
COL2A1P02458 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.56□□□□□ -2
COL2A1P02458 RPL39P40-201ENST00000445481 146 ntBASIC2.56□□□□□ -2
COL2A1P02458 AL035666.1-201ENST00000446195 348 ntBASIC2.56□□□□□ -2
COL2A1P02458 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.56□□□□□ -2
COL2A1P02458 FABP5P13-201ENST00000452144 328 ntBASIC2.56□□□□□ -2
COL2A1P02458 AP000705.1-201ENST00000454567 350 ntBASIC2.56□□□□□ -2
COL2A1P02458 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.56□□□□□ -2
COL2A1P02458 AC135721.1-201ENST00000497954 479 ntBASIC2.56□□□□□ -2
COL2A1P02458 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.56□□□□□ -2
COL2A1P02458 RNU6-27P-201ENST00000516146 107 ntBASIC2.56□□□□□ -2
COL2A1P02458 RNU2-10P-201ENST00000516375 211 ntBASIC2.56□□□□□ -2
COL2A1P02458 RNU6-764P-201ENST00000516396 105 ntBASIC2.56□□□□□ -2
COL2A1P02458 RNU6-1271P-201ENST00000517049 105 ntBASIC2.56□□□□□ -2
COL2A1P02458 AC022634.1-201ENST00000520765 532 ntBASIC2.56□□□□□ -2
COL2A1P02458 AC011979.2-201ENST00000527568 352 ntBASIC2.56□□□□□ -2
COL2A1P02458 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.56□□□□□ -2
COL2A1P02458 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.56□□□□□ -2
COL2A1P02458 AL442067.1-201ENST00000613261 223 ntBASIC2.56□□□□□ -2
COL2A1P02458 FAM157A-202ENST00000615155 405 ntBASIC2.56□□□□□ -2
COL2A1P02458 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.56□□□□□ -2
COL2A1P02458 AL669831.3-213ENST00000636676 183 ntBASIC2.56□□□□□ -2
COL2A1P02458 AL138713.1-201ENST00000624026 2130 ntBASIC2.56□□□□□ -2
COL2A1P02458 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.56□□□□□ -2
COL2A1P02458 MTND5P10-201ENST00000603719 1809 ntBASIC2.55□□□□□ -2
COL2A1P02458 MTND5P28-201ENST00000438005 1594 ntBASIC2.55□□□□□ -2
COL2A1P02458 SNORD113-7-201ENST00000363762 77 ntBASIC2.55□□□□□ -2
COL2A1P02458 RNU5E-6P-201ENST00000365574 115 ntBASIC2.55□□□□□ -2
COL2A1P02458 RNU6-890P-201ENST00000384121 107 ntBASIC2.55□□□□□ -2
COL2A1P02458 AL136372.1-201ENST00000403060 228 ntBASIC2.55□□□□□ -2
COL2A1P02458 RNA5SP111-201ENST00000411386 101 ntBASIC2.55□□□□□ -2
COL2A1P02458 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.55□□□□□ -2
COL2A1P02458 MCFD2P1-201ENST00000417812 300 ntBASIC2.55□□□□□ -2
COL2A1P02458 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.55□□□□□ -2
COL2A1P02458 MTCYBP9-201ENST00000431021 303 ntBASIC2.55□□□□□ -2
COL2A1P02458 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.55□□□□□ -2
COL2A1P02458 AL583843.1-201ENST00000456070 346 ntBASIC2.55□□□□□ -2
COL2A1P02458 AC108059.3-201ENST00000456388 214 ntBASIC2.55□□□□□ -2
COL2A1P02458 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.55□□□□□ -2
COL2A1P02458 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.55□□□□□ -2
COL2A1P02458 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.55□□□□□ -2
COL2A1P02458 AC098591.2-201ENST00000510152 315 ntBASIC2.55□□□□□ -2
COL2A1P02458 MTCO3P44-201ENST00000510977 541 ntBASIC2.55□□□□□ -2
COL2A1P02458 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.55□□□□□ -2
COL2A1P02458 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.55□□□□□ -2
COL2A1P02458 RNU6-635P-201ENST00000516651 102 ntBASIC2.55□□□□□ -2
COL2A1P02458 RNU6-1332P-201ENST00000516666 104 ntBASIC2.55□□□□□ -2
COL2A1P02458 RN7SKP82-201ENST00000516786 223 ntBASIC2.55□□□□□ -2
COL2A1P02458 RNU6-699P-201ENST00000517081 110 ntBASIC2.55□□□□□ -2
COL2A1P02458 MIR4512-201ENST00000583257 77 ntBASIC2.55□□□□□ -2
COL2A1P02458 AC018889.1-201ENST00000605372 397 ntBASIC2.55□□□□□ -2
COL2A1P02458 AC011373.1-201ENST00000607270 237 ntBASIC2.55□□□□□ -2
COL2A1P02458 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.55□□□□□ -2
COL2A1P02458 AC012531.5-201ENST00000611375 151 ntBASIC2.55□□□□□ -2
COL2A1P02458 AL589994.2-201ENST00000621124 579 ntBASIC2.55□□□□□ -2
COL2A1P02458 U6.98-201ENST00000637157 84 ntBASIC2.55□□□□□ -2
COL2A1P02458 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.55□□□□□ -2
COL2A1P02458 AL359893.1-201ENST00000447628 1580 ntBASIC2.55□□□□□ -2
COL2A1P02458 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
COL2A1P02458 MTND5P7-201ENST00000413558 1798 ntBASIC2.55□□□□□ -2
COL2A1P02458 ZNF33CP-201ENST00000432492 2030 ntBASIC2.54□□□□□ -2
COL2A1P02458 RNU6-1078P-201ENST00000364522 103 ntBASIC2.54□□□□□ -2
COL2A1P02458 RNU6-450P-201ENST00000364654 107 ntBASIC2.54□□□□□ -2
COL2A1P02458 U8.9-201ENST00000365667 134 ntBASIC2.54□□□□□ -2
COL2A1P02458 SET-203ENST00000372688 801 ntTSL 2 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms