Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC021146.2-201ENST00000504736 556 ntBASIC2.77□□□□□ -1.97
LDLRP01130 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.77□□□□□ -1.97
LDLRP01130 RN7SKP132-201ENST00000516001 208 ntBASIC2.77□□□□□ -1.97
LDLRP01130 RNU6-703P-201ENST00000516946 107 ntBASIC2.77□□□□□ -1.97
LDLRP01130 SNORA31.21-201ENST00000517180 77 ntBASIC2.77□□□□□ -1.97
LDLRP01130 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.77□□□□□ -1.97
LDLRP01130 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.77□□□□□ -1.97
LDLRP01130 AC107016.2-201ENST00000547968 190 ntBASIC2.77□□□□□ -1.97
LDLRP01130 MIR4782-201ENST00000577987 79 ntBASIC2.77□□□□□ -1.97
LDLRP01130 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.77□□□□□ -1.97
LDLRP01130 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.77□□□□□ -1.97
LDLRP01130 AC008739.2-201ENST00000597006 317 ntBASIC2.77□□□□□ -1.97
LDLRP01130 Z82243.1-201ENST00000609432 473 ntBASIC2.77□□□□□ -1.97
LDLRP01130 AC090115.4-201ENST00000609970 188 ntBASIC2.77□□□□□ -1.97
LDLRP01130 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.77□□□□□ -1.97
LDLRP01130 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.77□□□□□ -1.97
LDLRP01130 AC010205.1-201ENST00000616668 449 ntBASIC2.77□□□□□ -1.97
LDLRP01130 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.77□□□□□ -1.97
LDLRP01130 AC110079.1-202ENST00000635213 138 ntBASIC2.77□□□□□ -1.97
LDLRP01130 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LDLRP01130 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.77□□□□□ -1.97
LDLRP01130 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
LDLRP01130 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LDLRP01130 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LDLRP01130 RNU6-254P-201ENST00000363377 107 ntBASIC2.76□□□□□ -1.97
LDLRP01130 Y_RNA.133-201ENST00000363428 110 ntBASIC2.76□□□□□ -1.97
LDLRP01130 Y_RNA.144-201ENST00000363521 113 ntBASIC2.76□□□□□ -1.97
LDLRP01130 Y_RNA.197-201ENST00000364004 102 ntBASIC2.76□□□□□ -1.97
LDLRP01130 Y_RNA.422-201ENST00000384054 114 ntBASIC2.76□□□□□ -1.97
LDLRP01130 RNU6-308P-201ENST00000390957 107 ntBASIC2.76□□□□□ -1.97
LDLRP01130 SNORA16.2-201ENST00000390991 127 ntBASIC2.76□□□□□ -1.97
LDLRP01130 SNORA40C-201ENST00000391285 128 ntBASIC2.76□□□□□ -1.97
LDLRP01130 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.76□□□□□ -1.97
LDLRP01130 RPL26P27-201ENST00000414397 437 ntBASIC2.76□□□□□ -1.97
LDLRP01130 AC113618.1-201ENST00000416747 285 ntBASIC2.76□□□□□ -1.97
LDLRP01130 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.76□□□□□ -1.97
LDLRP01130 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.76□□□□□ -1.97
LDLRP01130 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.76□□□□□ -1.97
LDLRP01130 MYL8P-204ENST00000431574 518 ntBASIC2.76□□□□□ -1.97
LDLRP01130 AL078601.1-201ENST00000444542 271 ntBASIC2.76□□□□□ -1.97
LDLRP01130 AC108938.1-201ENST00000451204 136 ntBASIC2.76□□□□□ -1.97
LDLRP01130 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.76□□□□□ -1.97
LDLRP01130 SEM1P1-201ENST00000506694 209 ntBASIC2.76□□□□□ -1.97
LDLRP01130 AC008716.1-201ENST00000511084 513 ntBASIC2.76□□□□□ -1.97
LDLRP01130 AC104136.1-201ENST00000512969 394 ntBASIC2.76□□□□□ -1.97
LDLRP01130 RNU6-1183P-201ENST00000517054 60 ntBASIC2.76□□□□□ -1.97
LDLRP01130 RNU6-1137P-201ENST00000517073 99 ntBASIC2.76□□□□□ -1.97
LDLRP01130 AP000889.2-201ENST00000532684 490 ntBASIC2.76□□□□□ -1.97
LDLRP01130 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.76□□□□□ -1.97
LDLRP01130 AC091544.4-201ENST00000555268 342 ntBASIC2.76□□□□□ -1.97
LDLRP01130 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.76□□□□□ -1.97
LDLRP01130 MIR3672-201ENST00000584290 82 ntBASIC2.76□□□□□ -1.97
LDLRP01130 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.76□□□□□ -1.97
LDLRP01130 AL355598.1-201ENST00000604169 202 ntBASIC2.76□□□□□ -1.97
LDLRP01130 AC016925.2-201ENST00000605108 242 ntBASIC2.76□□□□□ -1.97
LDLRP01130 ATP1B3P1-201ENST00000605365 821 ntBASIC2.76□□□□□ -1.97
LDLRP01130 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.76□□□□□ -1.97
LDLRP01130 uc_338.22-201ENST00000622722 187 ntBASIC2.76□□□□□ -1.97
LDLRP01130 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.76□□□□□ -1.97
LDLRP01130 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.76□□□□□ -1.97
LDLRP01130 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
LDLRP01130 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LDLRP01130 AC121333.1-201ENST00000567488 2709 ntBASIC2.76□□□□□ -1.97
LDLRP01130 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LDLRP01130 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.75□□□□□ -1.97
LDLRP01130 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LDLRP01130 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LDLRP01130 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LDLRP01130 RNU6-1252P-201ENST00000363054 104 ntBASIC2.75□□□□□ -1.97
LDLRP01130 RNU6-1303P-201ENST00000364841 107 ntBASIC2.75□□□□□ -1.97
LDLRP01130 RNU6-166P-201ENST00000384371 107 ntBASIC2.75□□□□□ -1.97
LDLRP01130 RNU6-434P-201ENST00000384376 107 ntBASIC2.75□□□□□ -1.97
LDLRP01130 RN7SKP158-201ENST00000410453 326 ntBASIC2.75□□□□□ -1.97
LDLRP01130 NDUFS5P4-201ENST00000412983 318 ntBASIC2.75□□□□□ -1.97
LDLRP01130 BX682237.1-201ENST00000415016 335 ntBASIC2.75□□□□□ -1.97
LDLRP01130 IPO7P1-201ENST00000442031 636 ntBASIC2.75□□□□□ -1.97
LDLRP01130 AL137792.2-201ENST00000443484 235 ntBASIC2.75□□□□□ -1.97
LDLRP01130 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.75□□□□□ -1.97
LDLRP01130 AL109933.2-201ENST00000452651 260 ntBASIC2.75□□□□□ -1.97
LDLRP01130 MTATP6P7-201ENST00000453315 681 ntBASIC2.75□□□□□ -1.97
LDLRP01130 Y_RNA.635-201ENST00000459041 101 ntBASIC2.75□□□□□ -1.97
LDLRP01130 RN7SL297P-201ENST00000483161 293 ntBASIC2.75□□□□□ -1.97
LDLRP01130 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.75□□□□□ -1.97
LDLRP01130 AC093303.1-201ENST00000514549 295 ntBASIC2.75□□□□□ -1.97
LDLRP01130 RNU2-69P-201ENST00000516061 100 ntBASIC2.75□□□□□ -1.97
LDLRP01130 RNU6-566P-201ENST00000516790 107 ntBASIC2.75□□□□□ -1.97
LDLRP01130 RNU6-273P-201ENST00000516937 96 ntBASIC2.75□□□□□ -1.97
LDLRP01130 RN7SKP272-201ENST00000516988 232 ntBASIC2.75□□□□□ -1.97
LDLRP01130 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.75□□□□□ -1.97
LDLRP01130 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.75□□□□□ -1.97
LDLRP01130 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.75□□□□□ -1.97
LDLRP01130 RPL23AP88-201ENST00000605759 454 ntBASIC2.75□□□□□ -1.97
LDLRP01130 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.75□□□□□ -1.97
LDLRP01130 AC019193.3-201ENST00000609144 554 ntBASIC2.75□□□□□ -1.97
LDLRP01130 AC004852.3-201ENST00000614131 326 ntBASIC2.75□□□□□ -1.97
LDLRP01130 AC244517.12-201ENST00000623581 663 ntBASIC2.75□□□□□ -1.97
LDLRP01130 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
LDLRP01130 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.75□□□□□ -1.97
LDLRP01130 AC026241.1-201ENST00000517873 2142 ntBASIC2.75□□□□□ -1.97
LDLRP01130 AC010680.1-201ENST00000590024 3590 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms