Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC018462.2-201ENST00000605375 395 ntBASIC4.04□□□□□ -1.76
RAPGEF3O95398 AC124303.1-201ENST00000605703 360 ntBASIC4.04□□□□□ -1.76
RAPGEF3O95398 AL627309.6-201ENST00000606857 840 ntBASIC4.04□□□□□ -1.76
RAPGEF3O95398 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RAPGEF3O95398 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RAPGEF3O95398 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.03□□□□□ -1.76
RAPGEF3O95398 KPNA2P1-201ENST00000458289 1591 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 RNU6-37P-201ENST00000362692 107 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 Y_RNA.146-201ENST00000363549 102 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 RNU6-11P-201ENST00000364234 107 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 SNORD42.2-201ENST00000365570 69 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.03□□□□□ -1.76
RAPGEF3O95398 RNU6-25P-201ENST00000383873 107 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 RNU6-1-201ENST00000383898 107 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 Y_RNA.394-201ENST00000383942 103 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 RNU6-48P-201ENST00000384161 107 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 RNU6-36P-201ENST00000384172 107 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 RNU6-4P-201ENST00000384205 107 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 RNU6-5P-201ENST00000384238 107 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 RNU6-3P-201ENST00000384314 107 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 RNU6-16P-201ENST00000384385 107 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 RNU6-15P-201ENST00000384534 107 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 RNU6-2-201ENST00000384627 107 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 RNU6-29P-201ENST00000384637 107 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 RNU6-9-201ENST00000384776 107 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 RNU6-33P-201ENST00000384793 107 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RAPGEF3O95398 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.03□□□□□ -1.76
RAPGEF3O95398 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC4.03□□□□□ -1.76
RAPGEF3O95398 SNORD5.1-201ENST00000458800 75 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 RNU6-1037P-201ENST00000459571 107 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 AC026782.1-201ENST00000512952 449 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 RNA5SP282-201ENST00000516355 108 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RAPGEF3O95398 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.03□□□□□ -1.76
RAPGEF3O95398 LINC00933-203ENST00000559812 219 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.03□□□□□ -1.76
RAPGEF3O95398 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.03□□□□□ -1.76
RAPGEF3O95398 AC080078.3-201ENST00000605407 463 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 RNU6-6P-201ENST00000606623 107 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 PISRT1.1-201ENST00000616930 107 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 AC134503.1-201ENST00000633048 54 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 MTND5P7-201ENST00000413558 1798 ntBASIC4.03□□□□□ -1.76
RAPGEF3O95398 MTND5P10-201ENST00000603719 1809 ntBASIC4.02□□□□□ -1.77
RAPGEF3O95398 Y_RNA.128-201ENST00000363391 112 ntBASIC4.02□□□□□ -1.77
RAPGEF3O95398 RNU6-884P-201ENST00000363889 107 ntBASIC4.02□□□□□ -1.77
RAPGEF3O95398 SNORA75.4-201ENST00000391278 119 ntBASIC4.02□□□□□ -1.77
RAPGEF3O95398 RNU6-1050P-201ENST00000410388 107 ntBASIC4.02□□□□□ -1.77
RAPGEF3O95398 AL030996.1-201ENST00000411430 235 ntBASIC4.02□□□□□ -1.77
RAPGEF3O95398 AL513043.1-201ENST00000439124 535 ntBASIC4.02□□□□□ -1.77
RAPGEF3O95398 AC006026.2-201ENST00000457376 180 ntBASIC4.02□□□□□ -1.77
RAPGEF3O95398 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.02□□□□□ -1.77
RAPGEF3O95398 RPL23AP45-201ENST00000476406 468 ntBASIC4.02□□□□□ -1.77
RAPGEF3O95398 AC027575.1-201ENST00000481064 460 ntBASIC4.02□□□□□ -1.77
RAPGEF3O95398 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
RAPGEF3O95398 MTCYBP40-201ENST00000509390 1135 ntBASIC4.02□□□□□ -1.77
RAPGEF3O95398 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.02□□□□□ -1.77
RAPGEF3O95398 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.02□□□□□ -1.77
RAPGEF3O95398 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.02□□□□□ -1.77
RAPGEF3O95398 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.02□□□□□ -1.77
RAPGEF3O95398 ANP32BP3-201ENST00000559213 706 ntBASIC4.02□□□□□ -1.77
RAPGEF3O95398 AP000654.2-201ENST00000605633 586 ntBASIC4.02□□□□□ -1.77
RAPGEF3O95398 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RAPGEF3O95398 AC019193.3-201ENST00000609144 554 ntBASIC4.02□□□□□ -1.77
RAPGEF3O95398 AL138880.2-201ENST00000616214 239 ntBASIC4.02□□□□□ -1.77
RAPGEF3O95398 AL669831.3-213ENST00000636676 183 ntBASIC4.02□□□□□ -1.77
RAPGEF3O95398 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RAPGEF3O95398 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RAPGEF3O95398 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
RAPGEF3O95398 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RAPGEF3O95398 RNU6-658P-201ENST00000384606 106 ntBASIC4.01□□□□□ -1.77
RAPGEF3O95398 RPL32P35-201ENST00000415214 394 ntBASIC4.01□□□□□ -1.77
RAPGEF3O95398 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.01□□□□□ -1.77
RAPGEF3O95398 RPS15AP10-201ENST00000432472 382 ntBASIC4.01□□□□□ -1.77
RAPGEF3O95398 DAP3P1-201ENST00000441522 278 ntBASIC4.01□□□□□ -1.77
RAPGEF3O95398 UQCRHP3-201ENST00000451503 251 ntBASIC4.01□□□□□ -1.77
RAPGEF3O95398 RPL30P15-201ENST00000457129 321 ntBASIC4.01□□□□□ -1.77
RAPGEF3O95398 RNU7-187P-201ENST00000458985 68 ntBASIC4.01□□□□□ -1.77
RAPGEF3O95398 SRIP1-201ENST00000489235 288 ntBASIC4.01□□□□□ -1.77
RAPGEF3O95398 AC097473.1-201ENST00000508142 408 ntBASIC4.01□□□□□ -1.77
RAPGEF3O95398 AC113155.1-201ENST00000511141 769 ntBASIC4.01□□□□□ -1.77
RAPGEF3O95398 RNU6-928P-201ENST00000516876 104 ntBASIC4.01□□□□□ -1.77
RAPGEF3O95398 RNU6-1231P-201ENST00000517185 103 ntBASIC4.01□□□□□ -1.77
RAPGEF3O95398 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RAPGEF3O95398 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.01□□□□□ -1.77
RAPGEF3O95398 NACAP3-201ENST00000552100 481 ntBASIC4.01□□□□□ -1.77
RAPGEF3O95398 ZNF861P-201ENST00000588126 639 ntBASIC4.01□□□□□ -1.77
RAPGEF3O95398 AC093010.3-201ENST00000570269 15214 ntBASIC4.01□□□□□ -1.77
RAPGEF3O95398 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RAPGEF3O95398 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4□□□□□ -1.77
RAPGEF3O95398 RNU1-35P-201ENST00000362782 153 ntBASIC4□□□□□ -1.77
RAPGEF3O95398 RNU6-270P-201ENST00000364131 105 ntBASIC4□□□□□ -1.77
RAPGEF3O95398 RNU6-72P-201ENST00000384285 79 ntBASIC4□□□□□ -1.77
RAPGEF3O95398 AL079342.1-201ENST00000401460 267 ntBASIC4□□□□□ -1.77
RAPGEF3O95398 AL590004.1-201ENST00000405321 300 ntBASIC4□□□□□ -1.77
RAPGEF3O95398 U3.37-201ENST00000408528 213 ntBASIC4□□□□□ -1.77
RAPGEF3O95398 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4□□□□□ -1.77
RAPGEF3O95398 PCMTD1P1-201ENST00000455560 355 ntBASIC4□□□□□ -1.77
RAPGEF3O95398 AC003982.1-202ENST00000469928 248 ntBASIC4□□□□□ -1.77
RAPGEF3O95398 AC093303.1-201ENST00000514549 295 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms