Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 RNA5SP490-201ENST00000517141 136 ntBASIC1.6□□□□□ -2.15
SNX4O95219 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.6□□□□□ -2.15
SNX4O95219 AP002453.2-201ENST00000533503 320 ntBASIC1.6□□□□□ -2.15
SNX4O95219 MIR4255-201ENST00000579351 72 ntBASIC1.6□□□□□ -2.15
SNX4O95219 AC008521.1-201ENST00000587471 187 ntBASIC1.6□□□□□ -2.15
SNX4O95219 MIR502-201ENST00000606349 86 ntBASIC1.6□□□□□ -2.15
SNX4O95219 AC025754.2-201ENST00000606491 432 ntBASIC1.6□□□□□ -2.15
SNX4O95219 AC092140.2-201ENST00000618027 521 ntBASIC1.6□□□□□ -2.15
SNX4O95219 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SNX4O95219 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SNX4O95219 RNU6-414P-201ENST00000363705 104 ntBASIC1.59□□□□□ -2.15
SNX4O95219 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SNX4O95219 MIR544A-201ENST00000384855 91 ntBASIC1.59□□□□□ -2.15
SNX4O95219 MTCYBP36-201ENST00000404146 440 ntBASIC1.59□□□□□ -2.15
SNX4O95219 CALM2P2-201ENST00000428512 440 ntBASIC1.59□□□□□ -2.15
SNX4O95219 AL645568.3-201ENST00000433683 316 ntBASIC1.59□□□□□ -2.15
SNX4O95219 DUXAP8-207ENST00000456786 622 ntBASIC1.59□□□□□ -2.15
SNX4O95219 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.59□□□□□ -2.15
SNX4O95219 AC010409.1-201ENST00000487382 476 ntBASIC1.59□□□□□ -2.15
SNX4O95219 HMGN1P13-201ENST00000505795 138 ntBASIC1.59□□□□□ -2.15
SNX4O95219 AC034244.1-201ENST00000507687 207 ntBASIC1.59□□□□□ -2.15
SNX4O95219 TPT1P8-201ENST00000510120 555 ntBASIC1.59□□□□□ -2.15
SNX4O95219 AC005741.1-201ENST00000511094 432 ntBASIC1.59□□□□□ -2.15
SNX4O95219 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.59□□□□□ -2.15
SNX4O95219 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
SNX4O95219 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.59□□□□□ -2.15
SNX4O95219 AC002400.1-201ENST00000569310 726 ntBASIC1.59□□□□□ -2.15
SNX4O95219 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.59□□□□□ -2.15
SNX4O95219 AC010608.3-201ENST00000625048 527 ntBASIC1.59□□□□□ -2.15
SNX4O95219 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.59□□□□□ -2.15
SNX4O95219 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SNX4O95219 LINC02555-201ENST00000563933 1951 ntBASIC1.59□□□□□ -2.16
SNX4O95219 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
SNX4O95219 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
SNX4O95219 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SNX4O95219 RNY1P12-201ENST00000364251 105 ntBASIC1.58□□□□□ -2.16
SNX4O95219 SNORD32B-201ENST00000364460 84 ntBASIC1.58□□□□□ -2.16
SNX4O95219 RNU6-439P-201ENST00000384188 106 ntBASIC1.58□□□□□ -2.16
SNX4O95219 MIR764-201ENST00000390811 85 ntBASIC1.58□□□□□ -2.16
SNX4O95219 RN7SKP51-201ENST00000410781 304 ntBASIC1.58□□□□□ -2.16
SNX4O95219 CYCSP49-201ENST00000420810 319 ntBASIC1.58□□□□□ -2.16
SNX4O95219 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.58□□□□□ -2.16
SNX4O95219 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.58□□□□□ -2.16
SNX4O95219 RPS29P23-201ENST00000458635 123 ntBASIC1.58□□□□□ -2.16
SNX4O95219 RBBP4P6-201ENST00000508098 202 ntBASIC1.58□□□□□ -2.16
SNX4O95219 AF131216.2-201ENST00000512316 564 ntBASIC1.58□□□□□ -2.16
SNX4O95219 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.58□□□□□ -2.16
SNX4O95219 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.58□□□□□ -2.16
SNX4O95219 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.58□□□□□ -2.16
SNX4O95219 AC006927.3-201ENST00000638789 384 ntBASIC1.58□□□□□ -2.16
SNX4O95219 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
SNX4O95219 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.57□□□□□ -2.16
SNX4O95219 Y_RNA.332-201ENST00000365271 113 ntBASIC1.57□□□□□ -2.16
SNX4O95219 RNU6-61P-201ENST00000365528 109 ntBASIC1.57□□□□□ -2.16
SNX4O95219 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.57□□□□□ -2.16
SNX4O95219 RNU6-482P-201ENST00000391068 107 ntBASIC1.57□□□□□ -2.16
SNX4O95219 AL627390.1-201ENST00000396055 340 ntBASIC1.57□□□□□ -2.16
SNX4O95219 RNU2-8P-201ENST00000410727 190 ntBASIC1.57□□□□□ -2.16
SNX4O95219 MTCO2P8-201ENST00000412213 658 ntBASIC1.57□□□□□ -2.16
SNX4O95219 AL008987.1-201ENST00000415528 237 ntBASIC1.57□□□□□ -2.16
SNX4O95219 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.57□□□□□ -2.16
SNX4O95219 AL589872.1-201ENST00000426602 288 ntBASIC1.57□□□□□ -2.16
SNX4O95219 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.57□□□□□ -2.16
SNX4O95219 AC245517.4-201ENST00000448601 281 ntBASIC1.57□□□□□ -2.16
SNX4O95219 HMGN2P18-201ENST00000450680 270 ntBASIC1.57□□□□□ -2.16
SNX4O95219 AC005908.1-201ENST00000468701 347 ntBASIC1.57□□□□□ -2.16
SNX4O95219 AP001893.2-201ENST00000526949 202 ntBASIC1.57□□□□□ -2.16
SNX4O95219 AP003181.2-201ENST00000528941 181 ntBASIC1.57□□□□□ -2.16
SNX4O95219 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.57□□□□□ -2.16
SNX4O95219 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.57□□□□□ -2.16
SNX4O95219 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.57□□□□□ -2.16
SNX4O95219 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.57□□□□□ -2.16
SNX4O95219 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.57□□□□□ -2.16
SNX4O95219 AC105129.3-201ENST00000605455 485 ntBASIC1.57□□□□□ -2.16
SNX4O95219 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SNX4O95219 AC104010.1-201ENST00000616889 150 ntBASIC1.57□□□□□ -2.16
SNX4O95219 AL353997.5-201ENST00000618886 171 ntBASIC1.57□□□□□ -2.16
SNX4O95219 U4.7-201ENST00000638126 106 ntBASIC1.57□□□□□ -2.16
SNX4O95219 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.56□□□□□ -2.16
SNX4O95219 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SNX4O95219 RNU6-179P-201ENST00000363350 107 ntBASIC1.56□□□□□ -2.16
SNX4O95219 SNORD114-6-201ENST00000364393 72 ntBASIC1.56□□□□□ -2.16
SNX4O95219 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
SNX4O95219 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.56□□□□□ -2.16
SNX4O95219 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.56□□□□□ -2.16
SNX4O95219 AC007283.2-201ENST00000424739 197 ntBASIC1.56□□□□□ -2.16
SNX4O95219 AL365184.2-201ENST00000431139 435 ntBASIC1.56□□□□□ -2.16
SNX4O95219 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.56□□□□□ -2.16
SNX4O95219 MTCYBP39-201ENST00000437562 491 ntBASIC1.56□□□□□ -2.16
SNX4O95219 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.56□□□□□ -2.16
SNX4O95219 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.56□□□□□ -2.16
SNX4O95219 AL606662.1-201ENST00000445763 553 ntBASIC1.56□□□□□ -2.16
SNX4O95219 FTH1P25-201ENST00000447665 469 ntBASIC1.56□□□□□ -2.16
SNX4O95219 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.56□□□□□ -2.16
SNX4O95219 AC130509.1-201ENST00000464158 433 ntBASIC1.56□□□□□ -2.16
SNX4O95219 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.56□□□□□ -2.16
SNX4O95219 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.56□□□□□ -2.16
SNX4O95219 MTND3P5-201ENST00000512798 333 ntBASIC1.56□□□□□ -2.16
SNX4O95219 RNU6-685P-201ENST00000517088 95 ntBASIC1.56□□□□□ -2.16
SNX4O95219 MTND1P8-201ENST00000571424 950 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms