Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MIR544A-201ENST00000384855 91 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 MIR491-201ENST00000384877 84 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 MIR186-201ENST00000384988 86 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 AL360182.1-201ENST00000397433 468 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 RN7SKP32-201ENST00000410167 303 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 AL030996.1-201ENST00000411430 235 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 AP000275.1-201ENST00000411943 390 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 RPL39P29-201ENST00000447779 157 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 PMCHL2-203ENST00000457791 237 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.59□□□□□ -1.99
NKX2-2O95096 AC091826.1-201ENST00000514065 313 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.59□□□□□ -1.99
NKX2-2O95096 SMURF2P1-201ENST00000514992 481 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 SNORA25.11-201ENST00000515935 105 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 SNORA9.3-201ENST00000516383 129 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 RN7SKP40-201ENST00000517211 242 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 SNORA31.26-201ENST00000517250 137 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.59□□□□□ -1.99
NKX2-2O95096 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.59□□□□□ -1.99
NKX2-2O95096 AC027176.1-201ENST00000560204 514 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.59□□□□□ -1.99
NKX2-2O95096 CPDP1-201ENST00000579660 283 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 AC091135.1-201ENST00000585943 307 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 ZNF861P-201ENST00000588126 639 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 AC069294.1-201ENST00000608397 350 ntBASIC2.59□□□□□ -1.99
NKX2-2O95096 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NKX2-2O95096 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.59□□□□□ -2
NKX2-2O95096 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
NKX2-2O95096 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.58□□□□□ -2
NKX2-2O95096 RNU1-72P-201ENST00000362976 153 ntBASIC2.58□□□□□ -2
NKX2-2O95096 RNU6-529P-201ENST00000363383 104 ntBASIC2.58□□□□□ -2
NKX2-2O95096 RNU6-1141P-201ENST00000364520 107 ntBASIC2.58□□□□□ -2
NKX2-2O95096 MIR218-1-201ENST00000384999 110 ntBASIC2.58□□□□□ -2
NKX2-2O95096 RNU6-220P-201ENST00000390919 107 ntBASIC2.58□□□□□ -2
NKX2-2O95096 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
NKX2-2O95096 AL590004.2-201ENST00000404787 371 ntBASIC2.58□□□□□ -2
NKX2-2O95096 SNORD88.1-201ENST00000408684 91 ntBASIC2.58□□□□□ -2
NKX2-2O95096 RNU6-325P-201ENST00000411132 105 ntBASIC2.58□□□□□ -2
NKX2-2O95096 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.58□□□□□ -2
NKX2-2O95096 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.58□□□□□ -2
NKX2-2O95096 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.58□□□□□ -2
NKX2-2O95096 AL590632.1-201ENST00000424289 371 ntBASIC2.58□□□□□ -2
NKX2-2O95096 RPL23AP95-201ENST00000426806 265 ntBASIC2.58□□□□□ -2
NKX2-2O95096 AL445687.1-201ENST00000439946 251 ntBASIC2.58□□□□□ -2
NKX2-2O95096 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.58□□□□□ -2
NKX2-2O95096 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.58□□□□□ -2
NKX2-2O95096 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.58□□□□□ -2
NKX2-2O95096 MTND1P17-201ENST00000448961 204 ntBASIC2.58□□□□□ -2
NKX2-2O95096 MTND3P10-201ENST00000450967 341 ntBASIC2.58□□□□□ -2
NKX2-2O95096 MTND1P11-201ENST00000456661 876 ntBASIC2.58□□□□□ -2
NKX2-2O95096 U8.21-201ENST00000459536 136 ntBASIC2.58□□□□□ -2
NKX2-2O95096 RPL9P9-202ENST00000466501 579 ntBASIC2.58□□□□□ -2
NKX2-2O95096 RPL30P12-201ENST00000474666 353 ntBASIC2.58□□□□□ -2
NKX2-2O95096 RNU6-566P-201ENST00000516790 107 ntBASIC2.58□□□□□ -2
NKX2-2O95096 RNU6-612P-201ENST00000516909 102 ntBASIC2.58□□□□□ -2
NKX2-2O95096 RNA5SP454-201ENST00000517231 127 ntBASIC2.58□□□□□ -2
NKX2-2O95096 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.58□□□□□ -2
NKX2-2O95096 AC243972.3-201ENST00000539655 198 ntBASIC2.58□□□□□ -2
NKX2-2O95096 AC026464.5-201ENST00000562497 722 ntBASIC2.58□□□□□ -2
NKX2-2O95096 AC138761.3-201ENST00000579993 334 ntBASIC2.58□□□□□ -2
NKX2-2O95096 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.58□□□□□ -2
NKX2-2O95096 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.58□□□□□ -2
NKX2-2O95096 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.57□□□□□ -2
NKX2-2O95096 Y_RNA.40-201ENST00000362645 93 ntBASIC2.57□□□□□ -2
NKX2-2O95096 RNU6-1285P-201ENST00000363480 105 ntBASIC2.57□□□□□ -2
NKX2-2O95096 RNU6-1317P-201ENST00000364582 104 ntBASIC2.57□□□□□ -2
NKX2-2O95096 Y_RNA.303-201ENST00000364998 94 ntBASIC2.57□□□□□ -2
NKX2-2O95096 SNORA18.3-201ENST00000384122 132 ntBASIC2.57□□□□□ -2
NKX2-2O95096 RNU6-43P-201ENST00000384302 107 ntBASIC2.57□□□□□ -2
NKX2-2O95096 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.57□□□□□ -2
NKX2-2O95096 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.57□□□□□ -2
NKX2-2O95096 AC008267.5-201ENST00000424928 265 ntBASIC2.57□□□□□ -2
NKX2-2O95096 AIMP1P2-201ENST00000425294 312 ntBASIC2.57□□□□□ -2
NKX2-2O95096 AC098614.3-201ENST00000438957 440 ntBASIC2.57□□□□□ -2
NKX2-2O95096 AL135938.1-201ENST00000443141 297 ntBASIC2.57□□□□□ -2
NKX2-2O95096 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.57□□□□□ -2
NKX2-2O95096 AL031659.1-201ENST00000447075 539 ntBASIC2.57□□□□□ -2
NKX2-2O95096 EEF1B2P7-201ENST00000451177 676 ntBASIC2.57□□□□□ -2
NKX2-2O95096 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.57□□□□□ -2
NKX2-2O95096 RNU7-187P-201ENST00000458985 68 ntBASIC2.57□□□□□ -2
NKX2-2O95096 AC130509.1-201ENST00000464158 433 ntBASIC2.57□□□□□ -2
NKX2-2O95096 RPL39P5-202ENST00000512505 151 ntBASIC2.57□□□□□ -2
NKX2-2O95096 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.57□□□□□ -2
NKX2-2O95096 MIR4506-201ENST00000584693 77 ntBASIC2.57□□□□□ -2
NKX2-2O95096 AL161756.2-201ENST00000604597 246 ntBASIC2.57□□□□□ -2
NKX2-2O95096 AC107871.2-201ENST00000612894 502 ntBASIC2.57□□□□□ -2
NKX2-2O95096 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.57□□□□□ -2
NKX2-2O95096 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.57□□□□□ -2
NKX2-2O95096 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.56□□□□□ -2
NKX2-2O95096 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.56□□□□□ -2
NKX2-2O95096 RNU6-227P-201ENST00000362865 103 ntBASIC2.56□□□□□ -2
NKX2-2O95096 SNORD56.5-201ENST00000364281 72 ntBASIC2.56□□□□□ -2
NKX2-2O95096 RNU2-25P-201ENST00000411041 191 ntBASIC2.56□□□□□ -2
NKX2-2O95096 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.56□□□□□ -2
NKX2-2O95096 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.56□□□□□ -2
NKX2-2O95096 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.56□□□□□ -2
NKX2-2O95096 PPP1R2P5-201ENST00000457256 603 ntBASIC2.56□□□□□ -2
NKX2-2O95096 RPS29P27-201ENST00000463711 170 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms