Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.54□□□□□ -2.16
NPHP4O75161 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.54□□□□□ -2.16
NPHP4O75161 ZNF519P3-201ENST00000557158 1032 ntBASIC1.54□□□□□ -2.16
NPHP4O75161 AC078899.2-201ENST00000595282 212 ntBASIC1.54□□□□□ -2.16
NPHP4O75161 DEFB131E-202ENST00000602581 683 ntBASIC1.54□□□□□ -2.16
NPHP4O75161 AC121334.2-201ENST00000605387 271 ntBASIC1.54□□□□□ -2.16
NPHP4O75161 AL158032.1-201ENST00000605401 106 ntBASIC1.54□□□□□ -2.16
NPHP4O75161 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.54□□□□□ -2.16
NPHP4O75161 AC022306.3-201ENST00000619930 550 ntBASIC1.54□□□□□ -2.16
NPHP4O75161 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.54□□□□□ -2.16
NPHP4O75161 AP003400.5-201ENST00000624827 617 ntBASIC1.54□□□□□ -2.16
NPHP4O75161 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
NPHP4O75161 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
NPHP4O75161 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.53□□□□□ -2.16
NPHP4O75161 AC118469.1-201ENST00000442943 488 ntBASIC1.53□□□□□ -2.16
NPHP4O75161 AL606517.1-201ENST00000446914 387 ntBASIC1.53□□□□□ -2.16
NPHP4O75161 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.53□□□□□ -2.16
NPHP4O75161 MED28P2-201ENST00000475771 317 ntBASIC1.53□□□□□ -2.16
NPHP4O75161 RNU6-201P-201ENST00000517100 61 ntBASIC1.53□□□□□ -2.16
NPHP4O75161 AC034114.1-201ENST00000520293 285 ntBASIC1.53□□□□□ -2.16
NPHP4O75161 MTND4LP18-201ENST00000526864 291 ntBASIC1.53□□□□□ -2.16
NPHP4O75161 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.53□□□□□ -2.16
NPHP4O75161 AC136619.2-201ENST00000563361 631 ntBASIC1.53□□□□□ -2.16
NPHP4O75161 AL109918.3-201ENST00000603072 338 ntBASIC1.53□□□□□ -2.16
NPHP4O75161 AC112187.2-201ENST00000604345 283 ntBASIC1.53□□□□□ -2.16
NPHP4O75161 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.53□□□□□ -2.16
NPHP4O75161 AP002782.1-201ENST00000623107 614 ntBASIC1.53□□□□□ -2.16
NPHP4O75161 FRG1KP-201ENST00000623592 341 ntBASIC1.53□□□□□ -2.16
NPHP4O75161 AL078595.3-201ENST00000623815 1166 ntBASIC1.53□□□□□ -2.16
NPHP4O75161 AC092656.1-203ENST00000624134 423 ntBASIC1.53□□□□□ -2.16
NPHP4O75161 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.53□□□□□ -2.16
NPHP4O75161 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.53□□□□□ -2.16
NPHP4O75161 AL445523.1-201ENST00000451184 1362 ntBASIC1.53□□□□□ -2.17
NPHP4O75161 Y_RNA.18-201ENST00000362461 102 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 RNU6-529P-201ENST00000363383 104 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 RNU6-925P-201ENST00000384629 104 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 MIR518A2-201ENST00000384966 87 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 AL356432.1-201ENST00000405809 419 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 CYCSP33-201ENST00000414485 327 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 AC114491.1-201ENST00000416095 246 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 AL365338.1-201ENST00000422282 858 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.52□□□□□ -2.17
NPHP4O75161 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.52□□□□□ -2.17
NPHP4O75161 RPL37P21-201ENST00000435890 276 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 RPL23AP6-201ENST00000446637 472 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 HSPE1P24-201ENST00000450782 238 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 DUXAP8-207ENST00000456786 622 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.52□□□□□ -2.17
NPHP4O75161 RNU2-53P-201ENST00000516257 147 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 RNU2-10P-201ENST00000516375 211 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 RNU5A-4P-201ENST00000516588 111 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 SNORA48.11-201ENST00000517015 89 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.52□□□□□ -2.17
NPHP4O75161 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.52□□□□□ -2.17
NPHP4O75161 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.52□□□□□ -2.17
NPHP4O75161 CYCSP27-201ENST00000527643 293 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.52□□□□□ -2.17
NPHP4O75161 AP003122.4-201ENST00000530980 758 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.52□□□□□ -2.17
NPHP4O75161 MIR4299-201ENST00000577899 72 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 MIR3973-201ENST00000579824 107 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 MIR4999-201ENST00000585029 91 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 BNIP3P30-201ENST00000601184 574 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 CLIC4P2-201ENST00000601934 717 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 AC112191.3-201ENST00000604371 277 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 AC105129.3-201ENST00000605455 485 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 RNU6-91P-201ENST00000607774 107 ntBASIC1.52□□□□□ -2.17
NPHP4O75161 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.52□□□□□ -2.17
NPHP4O75161 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
NPHP4O75161 RNY4P24-201ENST00000362735 96 ntBASIC1.51□□□□□ -2.17
NPHP4O75161 RNU6-942P-201ENST00000363002 107 ntBASIC1.51□□□□□ -2.17
NPHP4O75161 RNA5SP457-201ENST00000363657 124 ntBASIC1.51□□□□□ -2.17
NPHP4O75161 RNU6-960P-201ENST00000364056 120 ntBASIC1.51□□□□□ -2.17
NPHP4O75161 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.51□□□□□ -2.17
NPHP4O75161 Y_RNA.623-201ENST00000411128 95 ntBASIC1.51□□□□□ -2.17
NPHP4O75161 UBE2V1P10-201ENST00000414685 269 ntBASIC1.51□□□□□ -2.17
NPHP4O75161 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
NPHP4O75161 AC106883.1-201ENST00000418805 562 ntBASIC1.51□□□□□ -2.17
NPHP4O75161 AC007283.2-201ENST00000424739 197 ntBASIC1.51□□□□□ -2.17
NPHP4O75161 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.51□□□□□ -2.17
NPHP4O75161 AL353689.1-201ENST00000438895 199 ntBASIC1.51□□□□□ -2.17
NPHP4O75161 MTND6P13-201ENST00000443510 523 ntBASIC1.51□□□□□ -2.17
NPHP4O75161 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.51□□□□□ -2.17
NPHP4O75161 AL357134.1-201ENST00000445848 426 ntBASIC1.51□□□□□ -2.17
NPHP4O75161 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.51□□□□□ -2.17
NPHP4O75161 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
NPHP4O75161 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.51□□□□□ -2.17
NPHP4O75161 RPL30P12-201ENST00000474666 353 ntBASIC1.51□□□□□ -2.17
NPHP4O75161 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.51□□□□□ -2.17
NPHP4O75161 RNU6-667P-201ENST00000517186 102 ntBASIC1.51□□□□□ -2.17
NPHP4O75161 RNU6-586P-201ENST00000517265 104 ntBASIC1.51□□□□□ -2.17
NPHP4O75161 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.51□□□□□ -2.17
NPHP4O75161 HSBP1P1-201ENST00000555205 166 ntBASIC1.51□□□□□ -2.17
NPHP4O75161 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.51□□□□□ -2.17
NPHP4O75161 AC073410.2-201ENST00000603240 332 ntBASIC1.51□□□□□ -2.17
NPHP4O75161 AC018714.1-201ENST00000605028 208 ntBASIC1.51□□□□□ -2.17
NPHP4O75161 AC123912.5-201ENST00000605470 343 ntBASIC1.51□□□□□ -2.17
NPHP4O75161 AC004908.3-201ENST00000610248 625 ntBASIC1.51□□□□□ -2.17
NPHP4O75161 AC090517.3-201ENST00000625170 141 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms