Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 AC022447.4-201ENST00000504053 364 ntBASIC1.29□□□□□ -2.2
GMDSO60547 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.29□□□□□ -2.2
GMDSO60547 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.29□□□□□ -2.2
GMDSO60547 AC009646.1-201ENST00000510455 318 ntBASIC1.29□□□□□ -2.2
GMDSO60547 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.29□□□□□ -2.2
GMDSO60547 AC005741.1-201ENST00000511094 432 ntBASIC1.29□□□□□ -2.2
GMDSO60547 RNU5A-4P-201ENST00000516588 111 ntBASIC1.29□□□□□ -2.2
GMDSO60547 RNA5SP490-201ENST00000517141 136 ntBASIC1.29□□□□□ -2.2
GMDSO60547 SNORA31.24-201ENST00000517232 57 ntBASIC1.29□□□□□ -2.2
GMDSO60547 AP005597.4-201ENST00000526762 229 ntBASIC1.29□□□□□ -2.2
GMDSO60547 AC087441.2-201ENST00000529141 262 ntBASIC1.29□□□□□ -2.2
GMDSO60547 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.29□□□□□ -2.2
GMDSO60547 ZNF519P3-201ENST00000557158 1032 ntBASIC1.29□□□□□ -2.2
GMDSO60547 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.29□□□□□ -2.2
GMDSO60547 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.29□□□□□ -2.2
GMDSO60547 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.29□□□□□ -2.2
GMDSO60547 AL031281.1-201ENST00000604049 488 ntBASIC1.29□□□□□ -2.2
GMDSO60547 AP001485.1-201ENST00000604799 199 ntBASIC1.29□□□□□ -2.2
GMDSO60547 AC018889.1-201ENST00000605372 397 ntBASIC1.29□□□□□ -2.2
GMDSO60547 AP000720.1-201ENST00000625091 483 ntBASIC1.29□□□□□ -2.2
GMDSO60547 MTND4P9-201ENST00000507819 1346 ntBASIC1.29□□□□□ -2.2
GMDSO60547 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
GMDSO60547 RNU6-78P-201ENST00000362897 107 ntBASIC1.28□□□□□ -2.2
GMDSO60547 RNU6-527P-201ENST00000363425 104 ntBASIC1.28□□□□□ -2.2
GMDSO60547 RNU6-60P-201ENST00000364792 103 ntBASIC1.28□□□□□ -2.2
GMDSO60547 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
GMDSO60547 RNU6-439P-201ENST00000384188 106 ntBASIC1.28□□□□□ -2.2
GMDSO60547 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.28□□□□□ -2.2
GMDSO60547 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.28□□□□□ -2.2
GMDSO60547 FTH1P12-201ENST00000432137 551 ntBASIC1.28□□□□□ -2.2
GMDSO60547 AC007969.2-201ENST00000441891 191 ntBASIC1.28□□□□□ -2.2
GMDSO60547 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.28□□□□□ -2.2
GMDSO60547 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.28□□□□□ -2.2
GMDSO60547 AL122001.1-201ENST00000457027 370 ntBASIC1.28□□□□□ -2.2
GMDSO60547 AC010409.1-201ENST00000487382 476 ntBASIC1.28□□□□□ -2.2
GMDSO60547 MTCO3P9-201ENST00000506989 781 ntBASIC1.28□□□□□ -2.2
GMDSO60547 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.28□□□□□ -2.2
GMDSO60547 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.28□□□□□ -2.2
GMDSO60547 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.28□□□□□ -2.2
GMDSO60547 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.28□□□□□ -2.2
GMDSO60547 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.28□□□□□ -2.2
GMDSO60547 AL139418.1-201ENST00000613613 177 ntBASIC1.28□□□□□ -2.2
GMDSO60547 RMST_4.1-201ENST00000616886 107 ntBASIC1.28□□□□□ -2.2
GMDSO60547 AL590240.4-201ENST00000616908 390 ntBASIC1.28□□□□□ -2.2
GMDSO60547 LINC02555-201ENST00000563933 1951 ntBASIC1.28□□□□□ -2.2
GMDSO60547 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
GMDSO60547 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.27□□□□□ -2.21
GMDSO60547 RNU6-533P-201ENST00000384144 107 ntBASIC1.27□□□□□ -2.21
GMDSO60547 MIR1323-201ENST00000408090 73 ntBASIC1.27□□□□□ -2.21
GMDSO60547 EBAG9P1-201ENST00000418955 543 ntBASIC1.27□□□□□ -2.21
GMDSO60547 CALM2P2-201ENST00000428512 440 ntBASIC1.27□□□□□ -2.21
GMDSO60547 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.27□□□□□ -2.21
GMDSO60547 AC005908.1-201ENST00000468701 347 ntBASIC1.27□□□□□ -2.21
GMDSO60547 MTCYBP35-201ENST00000503630 1137 ntBASIC1.27□□□□□ -2.21
GMDSO60547 AC108210.2-201ENST00000503681 201 ntBASIC1.27□□□□□ -2.21
GMDSO60547 AC010587.1-201ENST00000505809 469 ntBASIC1.27□□□□□ -2.21
GMDSO60547 RNA5SP445-201ENST00000515889 115 ntBASIC1.27□□□□□ -2.21
GMDSO60547 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.27□□□□□ -2.21
GMDSO60547 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.27□□□□□ -2.21
GMDSO60547 MTND4P33-201ENST00000556706 766 ntBASIC1.27□□□□□ -2.21
GMDSO60547 AC015712.3-201ENST00000559380 164 ntBASIC1.27□□□□□ -2.21
GMDSO60547 MIR4298-201ENST00000584380 73 ntBASIC1.27□□□□□ -2.21
GMDSO60547 AC025754.2-201ENST00000606491 432 ntBASIC1.27□□□□□ -2.21
GMDSO60547 AP002782.1-201ENST00000623107 614 ntBASIC1.27□□□□□ -2.21
GMDSO60547 AL157786.1-207ENST00000627771 695 ntBASIC1.27□□□□□ -2.21
GMDSO60547 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.27□□□□□ -2.21
GMDSO60547 AP000560.1-201ENST00000624150 1937 ntBASIC1.27□□□□□ -2.21
GMDSO60547 SNORD33-201ENST00000362761 85 ntBASIC1.26□□□□□ -2.21
GMDSO60547 RNU6-371P-201ENST00000364283 108 ntBASIC1.26□□□□□ -2.21
GMDSO60547 Y_RNA.332-201ENST00000365271 113 ntBASIC1.26□□□□□ -2.21
GMDSO60547 RNU6-641P-201ENST00000384006 107 ntBASIC1.26□□□□□ -2.21
GMDSO60547 MIR544A-201ENST00000384855 91 ntBASIC1.26□□□□□ -2.21
GMDSO60547 MIR558-201ENST00000384920 94 ntBASIC1.26□□□□□ -2.21
GMDSO60547 MIR620-201ENST00000385232 95 ntBASIC1.26□□□□□ -2.21
GMDSO60547 RPL21P90-201ENST00000415692 466 ntBASIC1.26□□□□□ -2.21
GMDSO60547 AC114491.1-201ENST00000416095 246 ntBASIC1.26□□□□□ -2.21
GMDSO60547 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.26□□□□□ -2.21
GMDSO60547 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.26□□□□□ -2.21
GMDSO60547 FTH1P25-201ENST00000447665 469 ntBASIC1.26□□□□□ -2.21
GMDSO60547 AL360271.2-201ENST00000447710 161 ntBASIC1.26□□□□□ -2.21
GMDSO60547 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.26□□□□□ -2.21
GMDSO60547 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.26□□□□□ -2.21
GMDSO60547 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.26□□□□□ -2.21
GMDSO60547 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.26□□□□□ -2.21
GMDSO60547 RNU5F-2P-201ENST00000516066 82 ntBASIC1.26□□□□□ -2.21
GMDSO60547 AL356057.1-201ENST00000533798 831 ntBASIC1.26□□□□□ -2.21
GMDSO60547 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.26□□□□□ -2.21
GMDSO60547 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.26□□□□□ -2.21
GMDSO60547 AP000811.1-201ENST00000603803 651 ntBASIC1.26□□□□□ -2.21
GMDSO60547 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
GMDSO60547 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
GMDSO60547 ZNF29P-201ENST00000225587 168 ntBASIC1.25□□□□□ -2.21
GMDSO60547 U8.1-201ENST00000362843 134 ntBASIC1.25□□□□□ -2.21
GMDSO60547 RNU1-17P-201ENST00000363022 152 ntBASIC1.25□□□□□ -2.21
GMDSO60547 C1DP2-201ENST00000418167 426 ntBASIC1.25□□□□□ -2.21
GMDSO60547 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.25□□□□□ -2.21
GMDSO60547 ELOCP4-201ENST00000420090 333 ntBASIC1.25□□□□□ -2.21
GMDSO60547 AL589872.1-201ENST00000426602 288 ntBASIC1.25□□□□□ -2.21
GMDSO60547 AL354695.1-201ENST00000427935 228 ntBASIC1.25□□□□□ -2.21
GMDSO60547 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms