Protein–RNA interactions for Protein: O43310

CTIF, CBP80/20-dependent translation initiation factor, humanhuman

Known RBP Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTIFO43310 RNU6-310P-201ENST00000384655 107 ntBASIC3.13□□□□□ -1.91
CTIFO43310 RNU6-95P-201ENST00000384697 107 ntBASIC3.13□□□□□ -1.91
CTIFO43310 MIR606-201ENST00000384851 96 ntBASIC3.13□□□□□ -1.91
CTIFO43310 RNU6-308P-201ENST00000390957 107 ntBASIC3.13□□□□□ -1.91
CTIFO43310 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.13□□□□□ -1.91
CTIFO43310 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.13□□□□□ -1.91
CTIFO43310 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.13□□□□□ -1.91
CTIFO43310 RPS15AP5-201ENST00000436276 388 ntBASIC3.13□□□□□ -1.91
CTIFO43310 ELOCP24-201ENST00000456370 334 ntBASIC3.13□□□□□ -1.91
CTIFO43310 Y_RNA.653-201ENST00000459091 95 ntBASIC3.13□□□□□ -1.91
CTIFO43310 RN7SL601P-201ENST00000471221 293 ntBASIC3.13□□□□□ -1.91
CTIFO43310 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.13□□□□□ -1.91
CTIFO43310 AC090096.1-201ENST00000489168 390 ntBASIC3.13□□□□□ -1.91
CTIFO43310 MTCYBP40-201ENST00000509390 1135 ntBASIC3.13□□□□□ -1.91
CTIFO43310 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.13□□□□□ -1.91
CTIFO43310 SNORA31.21-201ENST00000517180 77 ntBASIC3.13□□□□□ -1.91
CTIFO43310 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTIFO43310 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.13□□□□□ -1.91
CTIFO43310 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.13□□□□□ -1.91
CTIFO43310 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.13□□□□□ -1.91
CTIFO43310 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.13□□□□□ -1.91
CTIFO43310 AL162730.1-201ENST00000605734 292 ntBASIC3.13□□□□□ -1.91
CTIFO43310 AC090617.7-201ENST00000623952 126 ntBASIC3.13□□□□□ -1.91
CTIFO43310 AL669831.3-213ENST00000636676 183 ntBASIC3.13□□□□□ -1.91
CTIFO43310 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.13□□□□□ -1.91
CTIFO43310 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CTIFO43310 CDC27P3-201ENST00000635418 1910 ntBASIC3.13□□□□□ -1.91
CTIFO43310 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.13□□□□□ -1.91
CTIFO43310 KPNA2P1-201ENST00000458289 1591 ntBASIC3.12□□□□□ -1.91
CTIFO43310 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CTIFO43310 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.12□□□□□ -1.91
CTIFO43310 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTIFO43310 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
CTIFO43310 RNU1-33P-201ENST00000364249 162 ntBASIC3.12□□□□□ -1.91
CTIFO43310 SNORA63C-201ENST00000364578 129 ntBASIC3.12□□□□□ -1.91
CTIFO43310 RNU6-738P-201ENST00000384531 106 ntBASIC3.12□□□□□ -1.91
CTIFO43310 Y_RNA.646-201ENST00000410980 101 ntBASIC3.12□□□□□ -1.91
CTIFO43310 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.12□□□□□ -1.91
CTIFO43310 RPS15AP10-201ENST00000432472 382 ntBASIC3.12□□□□□ -1.91
CTIFO43310 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.12□□□□□ -1.91
CTIFO43310 HIGD1AP11-201ENST00000438361 280 ntBASIC3.12□□□□□ -1.91
CTIFO43310 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.12□□□□□ -1.91
CTIFO43310 RNU6-1037P-201ENST00000459571 107 ntBASIC3.12□□□□□ -1.91
CTIFO43310 RPS29P2-201ENST00000479278 136 ntBASIC3.12□□□□□ -1.91
CTIFO43310 AL163540.1-201ENST00000485382 386 ntBASIC3.12□□□□□ -1.91
CTIFO43310 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.12□□□□□ -1.91
CTIFO43310 RNU6-377P-201ENST00000515965 102 ntBASIC3.12□□□□□ -1.91
CTIFO43310 RNU6-1045P-201ENST00000516321 107 ntBASIC3.12□□□□□ -1.91
CTIFO43310 RNU6-1016P-201ENST00000516689 94 ntBASIC3.12□□□□□ -1.91
CTIFO43310 SNORD59.2-201ENST00000516873 68 ntBASIC3.12□□□□□ -1.91
CTIFO43310 RNU1-54P-201ENST00000517181 120 ntBASIC3.12□□□□□ -1.91
CTIFO43310 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.12□□□□□ -1.91
CTIFO43310 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.12□□□□□ -1.91
CTIFO43310 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.12□□□□□ -1.91
CTIFO43310 MIR5690-201ENST00000583739 73 ntBASIC3.12□□□□□ -1.91
CTIFO43310 AC020895.1-201ENST00000595362 272 ntBASIC3.12□□□□□ -1.91
CTIFO43310 AL121917.1-203ENST00000605534 577 ntBASIC3.12□□□□□ -1.91
CTIFO43310 AC116312.1-201ENST00000606841 314 ntBASIC3.12□□□□□ -1.91
CTIFO43310 uc_338.22-201ENST00000622722 187 ntBASIC3.12□□□□□ -1.91
CTIFO43310 AC004944.1-201ENST00000517807 3059 ntBASIC3.12□□□□□ -1.91
CTIFO43310 Z83843.1-201ENST00000604070 3685 ntBASIC3.12□□□□□ -1.91
CTIFO43310 SNORD62.1-201ENST00000362541 86 ntBASIC3.11□□□□□ -1.91
CTIFO43310 RNU6-78P-201ENST00000362897 107 ntBASIC3.11□□□□□ -1.91
CTIFO43310 SNORA14A-201ENST00000364773 135 ntBASIC3.11□□□□□ -1.91
CTIFO43310 RNU1-100P-201ENST00000365255 165 ntBASIC3.11□□□□□ -1.91
CTIFO43310 RNU6-827P-201ENST00000365553 106 ntBASIC3.11□□□□□ -1.91
CTIFO43310 SNORD21-201ENST00000383953 95 ntBASIC3.11□□□□□ -1.91
CTIFO43310 Y_RNA.500-201ENST00000384466 111 ntBASIC3.11□□□□□ -1.91
CTIFO43310 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CTIFO43310 AC096664.2-201ENST00000411843 406 ntBASIC3.11□□□□□ -1.91
CTIFO43310 ATG3P1-201ENST00000419507 911 ntBASIC3.11□□□□□ -1.91
CTIFO43310 PMCHL1-202ENST00000423102 261 ntBASIC3.11□□□□□ -1.91
CTIFO43310 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.11□□□□□ -1.91
CTIFO43310 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.11□□□□□ -1.91
CTIFO43310 AK3P2-201ENST00000507976 429 ntBASIC3.11□□□□□ -1.91
CTIFO43310 AC116655.1-201ENST00000508324 901 ntBASIC3.11□□□□□ -1.91
CTIFO43310 AC116337.1-201ENST00000509680 687 ntBASIC3.11□□□□□ -1.91
CTIFO43310 AC026782.1-201ENST00000512952 449 ntBASIC3.11□□□□□ -1.91
CTIFO43310 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.11□□□□□ -1.91
CTIFO43310 RNU6-581P-201ENST00000516214 105 ntBASIC3.11□□□□□ -1.91
CTIFO43310 AC006199.1-201ENST00000548728 219 ntBASIC3.11□□□□□ -1.91
CTIFO43310 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.11□□□□□ -1.91
CTIFO43310 AC024153.1-201ENST00000603103 365 ntBASIC3.11□□□□□ -1.91
CTIFO43310 AC011890.2-201ENST00000613393 294 ntBASIC3.11□□□□□ -1.91
CTIFO43310 U4.7-201ENST00000638126 106 ntBASIC3.11□□□□□ -1.91
CTIFO43310 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTIFO43310 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTIFO43310 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CTIFO43310 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTIFO43310 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTIFO43310 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.1□□□□□ -1.91
CTIFO43310 VTRNA1-1-201ENST00000363120 99 ntBASIC3.1□□□□□ -1.91
CTIFO43310 Y_RNA.202-201ENST00000364083 110 ntBASIC3.1□□□□□ -1.91
CTIFO43310 RNU6-593P-201ENST00000364716 112 ntBASIC3.1□□□□□ -1.91
CTIFO43310 SNORA33.2-201ENST00000365413 134 ntBASIC3.1□□□□□ -1.91
CTIFO43310 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTIFO43310 SNORA22B-201ENST00000383876 138 ntBASIC3.1□□□□□ -1.91
CTIFO43310 RNU6-306P-201ENST00000384617 107 ntBASIC3.1□□□□□ -1.91
CTIFO43310 AC023141.4-201ENST00000412031 328 ntBASIC3.1□□□□□ -1.91
CTIFO43310 AL117339.3-201ENST00000418733 162 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms