Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.67□□□□□ -1.82
SHOXO15266 SNRPGP3-201ENST00000469405 227 ntBASIC3.67□□□□□ -1.82
SHOXO15266 AC090525.1-201ENST00000479116 478 ntBASIC3.67□□□□□ -1.82
SHOXO15266 MIR4330-201ENST00000579077 105 ntBASIC3.67□□□□□ -1.82
SHOXO15266 MIR4436B2-201ENST00000581415 91 ntBASIC3.67□□□□□ -1.82
SHOXO15266 MIR4436B1-201ENST00000583272 91 ntBASIC3.67□□□□□ -1.82
SHOXO15266 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.67□□□□□ -1.82
SHOXO15266 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.67□□□□□ -1.82
SHOXO15266 AC004792.1-201ENST00000614523 137 ntBASIC3.67□□□□□ -1.82
SHOXO15266 SNORD98-201ENST00000636377 67 ntBASIC3.67□□□□□ -1.82
SHOXO15266 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHOXO15266 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHOXO15266 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHOXO15266 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.67□□□□□ -1.82
SHOXO15266 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHOXO15266 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.67□□□□□ -1.82
SHOXO15266 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHOXO15266 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SHOXO15266 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHOXO15266 RNU1-63P-201ENST00000383902 164 ntBASIC3.66□□□□□ -1.82
SHOXO15266 RNU6-198P-201ENST00000384258 104 ntBASIC3.66□□□□□ -1.82
SHOXO15266 MIR141-201ENST00000384975 95 ntBASIC3.66□□□□□ -1.82
SHOXO15266 MIR147B-201ENST00000390185 80 ntBASIC3.66□□□□□ -1.82
SHOXO15266 SNORA46.1-201ENST00000391069 153 ntBASIC3.66□□□□□ -1.82
SHOXO15266 HMGN2P8-201ENST00000391458 268 ntBASIC3.66□□□□□ -1.82
SHOXO15266 SDHCP2-201ENST00000398565 501 ntBASIC3.66□□□□□ -1.82
SHOXO15266 AC104332.1-201ENST00000440471 797 ntBASIC3.66□□□□□ -1.82
SHOXO15266 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.66□□□□□ -1.82
SHOXO15266 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.66□□□□□ -1.82
SHOXO15266 AC007215.1-201ENST00000464893 276 ntBASIC3.66□□□□□ -1.82
SHOXO15266 RPL7P49-201ENST00000471402 708 ntBASIC3.66□□□□□ -1.82
SHOXO15266 AC006517.1-201ENST00000480485 328 ntBASIC3.66□□□□□ -1.82
SHOXO15266 AIG1P1-201ENST00000503376 148 ntBASIC3.66□□□□□ -1.82
SHOXO15266 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.66□□□□□ -1.82
SHOXO15266 AC074133.1-201ENST00000515696 183 ntBASIC3.66□□□□□ -1.82
SHOXO15266 SNORA25.14-201ENST00000516481 132 ntBASIC3.66□□□□□ -1.82
SHOXO15266 AL137100.2-201ENST00000555786 315 ntBASIC3.66□□□□□ -1.82
SHOXO15266 MIR4737-201ENST00000583979 81 ntBASIC3.66□□□□□ -1.82
SHOXO15266 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.66□□□□□ -1.82
SHOXO15266 AL162424.1-201ENST00000602325 221 ntBASIC3.66□□□□□ -1.82
SHOXO15266 AC091152.3-201ENST00000604227 325 ntBASIC3.66□□□□□ -1.82
SHOXO15266 AL162713.1-201ENST00000604480 262 ntBASIC3.66□□□□□ -1.82
SHOXO15266 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.66□□□□□ -1.82
SHOXO15266 AC006111.3-201ENST00000622137 383 ntBASIC3.66□□□□□ -1.82
SHOXO15266 AC006001.4-201ENST00000622243 395 ntBASIC3.66□□□□□ -1.82
SHOXO15266 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHOXO15266 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHOXO15266 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHOXO15266 BX322639.1-202ENST00000423987 2213 ntBASIC3.66□□□□□ -1.82
SHOXO15266 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.66□□□□□ -1.82
SHOXO15266 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.65□□□□□ -1.82
SHOXO15266 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.65□□□□□ -1.82
SHOXO15266 AL109809.4-201ENST00000603520 2185 ntBASIC3.65□□□□□ -1.82
SHOXO15266 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SHOXO15266 Y_RNA.179-201ENST00000363844 90 ntBASIC3.65□□□□□ -1.83
SHOXO15266 Y_RNA.180-201ENST00000363867 113 ntBASIC3.65□□□□□ -1.83
SHOXO15266 SNORA72.2-201ENST00000365028 127 ntBASIC3.65□□□□□ -1.83
SHOXO15266 RNU6-1175P-201ENST00000365200 107 ntBASIC3.65□□□□□ -1.83
SHOXO15266 MIR487A-201ENST00000385009 80 ntBASIC3.65□□□□□ -1.83
SHOXO15266 U3.22-201ENST00000391120 215 ntBASIC3.65□□□□□ -1.83
SHOXO15266 AC017079.2-201ENST00000416102 485 ntBASIC3.65□□□□□ -1.83
SHOXO15266 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.65□□□□□ -1.83
SHOXO15266 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.65□□□□□ -1.83
SHOXO15266 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.65□□□□□ -1.83
SHOXO15266 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.65□□□□□ -1.83
SHOXO15266 RPL23AP93-201ENST00000440847 484 ntBASIC3.65□□□□□ -1.83
SHOXO15266 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.65□□□□□ -1.83
SHOXO15266 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.65□□□□□ -1.83
SHOXO15266 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.65□□□□□ -1.83
SHOXO15266 AC012671.1-201ENST00000451912 203 ntBASIC3.65□□□□□ -1.83
SHOXO15266 AP000705.1-201ENST00000454567 350 ntBASIC3.65□□□□□ -1.83
SHOXO15266 AC010099.1-201ENST00000455434 375 ntBASIC3.65□□□□□ -1.83
SHOXO15266 Y_RNA.644-201ENST00000459006 113 ntBASIC3.65□□□□□ -1.83
SHOXO15266 IGLV2-34-201ENST00000490007 283 ntBASIC3.65□□□□□ -1.83
SHOXO15266 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.65□□□□□ -1.83
SHOXO15266 Y_RNA.674-201ENST00000516362 113 ntBASIC3.65□□□□□ -1.83
SHOXO15266 SNORA31.16-201ENST00000516773 139 ntBASIC3.65□□□□□ -1.83
SHOXO15266 IGKV1-32-201ENST00000519290 311 ntBASIC3.65□□□□□ -1.83
SHOXO15266 RAB9BP1-201ENST00000519581 626 ntBASIC3.65□□□□□ -1.83
SHOXO15266 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.65□□□□□ -1.83
SHOXO15266 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.65□□□□□ -1.83
SHOXO15266 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.65□□□□□ -1.83
SHOXO15266 AC136624.4-201ENST00000573044 370 ntBASIC3.65□□□□□ -1.83
SHOXO15266 BPIFA4P-203ENST00000603168 689 ntBASIC3.65□□□□□ -1.83
SHOXO15266 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.65□□□□□ -1.83
SHOXO15266 IGHVIII-44-202ENST00000636235 289 ntBASIC3.65□□□□□ -1.83
SHOXO15266 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
SHOXO15266 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHOXO15266 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.65□□□□□ -1.83
SHOXO15266 UBE3AP2-201ENST00000429033 2259 ntBASIC3.65□□□□□ -1.83
SHOXO15266 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.65□□□□□ -1.83
SHOXO15266 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.65□□□□□ -1.83
SHOXO15266 AF127577.6-201ENST00000623352 2191 ntBASIC3.65□□□□□ -1.83
SHOXO15266 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.65□□□□□ -1.83
SHOXO15266 ZNF204P-201ENST00000416749 2397 ntBASIC3.65□□□□□ -1.83
SHOXO15266 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SHOXO15266 AC010680.1-201ENST00000590024 3590 ntBASIC3.64□□□□□ -1.83
SHOXO15266 Y_RNA.286-201ENST00000364813 102 ntBASIC3.64□□□□□ -1.83
SHOXO15266 Y_RNA.331-201ENST00000365267 102 ntBASIC3.64□□□□□ -1.83
SHOXO15266 RNU1-64P-201ENST00000365443 163 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms