Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 TMSB4XP6-201ENST00000415187 135 ntBASIC0.21□□□□□ -2.38
CHD1O14646 TMSB4XP1-201ENST00000424567 135 ntBASIC0.21□□□□□ -2.38
CHD1O14646 RPL30P1-201ENST00000488676 339 ntBASIC0.21□□□□□ -2.38
CHD1O14646 PDCD5P2-201ENST00000507570 312 ntBASIC0.21□□□□□ -2.38
CHD1O14646 AC093259.1-201ENST00000509755 300 ntBASIC0.21□□□□□ -2.38
CHD1O14646 AP000763.2-201ENST00000540641 163 ntBASIC0.21□□□□□ -2.38
CHD1O14646 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.21□□□□□ -2.38
CHD1O14646 MIR3664-201ENST00000579074 99 ntBASIC0.21□□□□□ -2.38
CHD1O14646 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
CHD1O14646 AC011451.2-201ENST00000604303 598 ntBASIC0.21□□□□□ -2.38
CHD1O14646 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.21□□□□□ -2.38
CHD1O14646 AC138627.2-201ENST00000624202 601 ntBASIC0.21□□□□□ -2.38
CHD1O14646 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.21□□□□□ -2.38
CHD1O14646 RNA5SP98-201ENST00000363158 137 ntBASIC0.21□□□□□ -2.38
CHD1O14646 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.21□□□□□ -2.38
CHD1O14646 RNU6-1054P-201ENST00000411293 104 ntBASIC0.21□□□□□ -2.38
CHD1O14646 AL451054.2-201ENST00000420896 202 ntBASIC0.21□□□□□ -2.38
CHD1O14646 RPEP5-201ENST00000441137 268 ntBASIC0.21□□□□□ -2.38
CHD1O14646 NDUFA5P7-201ENST00000452914 242 ntBASIC0.21□□□□□ -2.38
CHD1O14646 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.21□□□□□ -2.38
CHD1O14646 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.21□□□□□ -2.38
CHD1O14646 AC074344.1-201ENST00000512823 224 ntBASIC0.21□□□□□ -2.38
CHD1O14646 SNORA3.4-201ENST00000515969 96 ntBASIC0.21□□□□□ -2.38
CHD1O14646 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.21□□□□□ -2.38
CHD1O14646 AC007834.2-201ENST00000536310 343 ntBASIC0.21□□□□□ -2.38
CHD1O14646 AC242628.1-201ENST00000606810 391 ntBASIC0.21□□□□□ -2.38
CHD1O14646 AC004908.3-201ENST00000610248 625 ntBASIC0.21□□□□□ -2.38
CHD1O14646 AC104465.1-201ENST00000611365 139 ntBASIC0.21□□□□□ -2.38
CHD1O14646 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.21□□□□□ -2.38
CHD1O14646 ZNF849P-201ENST00000594711 1566 ntBASIC0.2□□□□□ -2.38
CHD1O14646 FARSBP1-201ENST00000435808 1778 ntBASIC0.2□□□□□ -2.38
CHD1O14646 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
CHD1O14646 RNA5SP361-201ENST00000362686 118 ntBASIC0.2□□□□□ -2.38
CHD1O14646 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.2□□□□□ -2.38
CHD1O14646 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.2□□□□□ -2.38
CHD1O14646 AC093648.1-201ENST00000623546 606 ntBASIC0.2□□□□□ -2.38
CHD1O14646 AC104820.1-201ENST00000624183 307 ntBASIC0.2□□□□□ -2.38
CHD1O14646 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
CHD1O14646 MIR194-1-201ENST00000384892 85 ntBASIC0.19□□□□□ -2.38
CHD1O14646 MIR605-201ENST00000385078 83 ntBASIC0.19□□□□□ -2.38
CHD1O14646 RN7SKP142-201ENST00000411236 328 ntBASIC0.19□□□□□ -2.38
CHD1O14646 AC092423.1-201ENST00000430165 186 ntBASIC0.19□□□□□ -2.38
CHD1O14646 MTND2P5-201ENST00000432656 1006 ntBASIC0.19□□□□□ -2.38
CHD1O14646 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.19□□□□□ -2.38
CHD1O14646 SNORA31.4-201ENST00000516049 129 ntBASIC0.19□□□□□ -2.38
CHD1O14646 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.19□□□□□ -2.38
CHD1O14646 MRPS36P5-201ENST00000551909 298 ntBASIC0.19□□□□□ -2.38
CHD1O14646 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.19□□□□□ -2.38
CHD1O14646 AL353997.4-201ENST00000586196 166 ntBASIC0.19□□□□□ -2.38
CHD1O14646 RPL21P136-201ENST00000605378 396 ntBASIC0.19□□□□□ -2.38
CHD1O14646 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.19□□□□□ -2.38
CHD1O14646 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
CHD1O14646 RPL21P111-201ENST00000418453 477 ntBASIC0.18□□□□□ -2.38
CHD1O14646 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.18□□□□□ -2.38
CHD1O14646 AC099677.2-201ENST00000436385 175 ntBASIC0.18□□□□□ -2.38
CHD1O14646 AL096829.2-201ENST00000446582 742 ntBASIC0.18□□□□□ -2.38
CHD1O14646 RNU5A-4P-201ENST00000516588 111 ntBASIC0.18□□□□□ -2.38
CHD1O14646 AC087897.1-201ENST00000550134 156 ntBASIC0.18□□□□□ -2.38
CHD1O14646 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.18□□□□□ -2.38
CHD1O14646 MTRNR2L2-201ENST00000604882 87 ntBASIC0.18□□□□□ -2.38
CHD1O14646 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
CHD1O14646 AL159152.1-201ENST00000635019 2587 ntBASIC0.18□□□□□ -2.38
CHD1O14646 AC090625.1-201ENST00000357130 210 ntBASIC0.18□□□□□ -2.38
CHD1O14646 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.18□□□□□ -2.38
CHD1O14646 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.18□□□□□ -2.38
CHD1O14646 RNA5SP168-201ENST00000516642 112 ntBASIC0.18□□□□□ -2.38
CHD1O14646 RNA5SP503-201ENST00000517047 117 ntBASIC0.18□□□□□ -2.38
CHD1O14646 RN7SKP258-201ENST00000517151 304 ntBASIC0.18□□□□□ -2.38
CHD1O14646 RNU6-840P-201ENST00000517275 65 ntBASIC0.18□□□□□ -2.38
CHD1O14646 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.18□□□□□ -2.38
CHD1O14646 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
CHD1O14646 MIR3169-201ENST00000578032 83 ntBASIC0.18□□□□□ -2.38
CHD1O14646 AC012065.4-201ENST00000602445 679 ntBASIC0.18□□□□□ -2.38
CHD1O14646 AC098614.4-201ENST00000607601 462 ntBASIC0.18□□□□□ -2.38
CHD1O14646 AC009509.4-201ENST00000619202 509 ntBASIC0.18□□□□□ -2.38
CHD1O14646 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
CHD1O14646 MTND4P14-201ENST00000435799 1354 ntBASIC0.17□□□□□ -2.38
CHD1O14646 SNORD114-31-201ENST00000363219 75 ntBASIC0.17□□□□□ -2.38
CHD1O14646 RNU5E-8P-201ENST00000363502 116 ntBASIC0.17□□□□□ -2.38
CHD1O14646 RNU6-658P-201ENST00000384606 106 ntBASIC0.17□□□□□ -2.38
CHD1O14646 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.17□□□□□ -2.38
CHD1O14646 AL121578.1-201ENST00000428051 892 ntBASIC0.17□□□□□ -2.38
CHD1O14646 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.17□□□□□ -2.38
CHD1O14646 AC012308.1-201ENST00000451232 178 ntBASIC0.17□□□□□ -2.38
CHD1O14646 AC008628.1-201ENST00000508663 265 ntBASIC0.17□□□□□ -2.38
CHD1O14646 AC118282.2-201ENST00000508739 374 ntBASIC0.17□□□□□ -2.38
CHD1O14646 AC079140.3-201ENST00000511111 550 ntBASIC0.17□□□□□ -2.38
CHD1O14646 AC011406.1-201ENST00000512440 370 ntBASIC0.17□□□□□ -2.38
CHD1O14646 RNA5SP255-201ENST00000516370 107 ntBASIC0.17□□□□□ -2.38
CHD1O14646 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.17□□□□□ -2.38
CHD1O14646 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.17□□□□□ -2.38
CHD1O14646 MIR5094-201ENST00000578766 85 ntBASIC0.17□□□□□ -2.38
CHD1O14646 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
CHD1O14646 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.16□□□□□ -2.38
CHD1O14646 RNU6-1078P-201ENST00000364522 103 ntBASIC0.16□□□□□ -2.38
CHD1O14646 Y_RNA.488-201ENST00000384403 102 ntBASIC0.16□□□□□ -2.38
CHD1O14646 Y_RNA.572-201ENST00000384757 98 ntBASIC0.16□□□□□ -2.38
CHD1O14646 AC138623.1-201ENST00000418060 216 ntBASIC0.16□□□□□ -2.38
CHD1O14646 AL589872.1-201ENST00000426602 288 ntBASIC0.16□□□□□ -2.38
CHD1O14646 CECR9-201ENST00000453421 199 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms