Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.55□□□□□ -2
AP3D1O14617 RNU6-323P-201ENST00000521915 107 ntBASIC2.55□□□□□ -2
AP3D1O14617 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.55□□□□□ -2
AP3D1O14617 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.55□□□□□ -2
AP3D1O14617 MIR3670-2-201ENST00000582974 65 ntBASIC2.55□□□□□ -2
AP3D1O14617 MIR3670-1-201ENST00000584160 65 ntBASIC2.55□□□□□ -2
AP3D1O14617 MIR3670-3-201ENST00000584855 65 ntBASIC2.55□□□□□ -2
AP3D1O14617 AL670379.2-201ENST00000604983 252 ntBASIC2.55□□□□□ -2
AP3D1O14617 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.55□□□□□ -2
AP3D1O14617 SNORD14A-201ENST00000606526 91 ntBASIC2.55□□□□□ -2
AP3D1O14617 AL357078.3-201ENST00000607528 618 ntBASIC2.55□□□□□ -2
AP3D1O14617 MIR3670-4-201ENST00000612260 65 ntBASIC2.55□□□□□ -2
AP3D1O14617 AC104237.2-201ENST00000612456 443 ntBASIC2.55□□□□□ -2
AP3D1O14617 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.55□□□□□ -2
AP3D1O14617 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.54□□□□□ -2
AP3D1O14617 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.54□□□□□ -2
AP3D1O14617 AP000560.1-201ENST00000624150 1937 ntBASIC2.54□□□□□ -2
AP3D1O14617 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
AP3D1O14617 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.54□□□□□ -2
AP3D1O14617 U3.13-201ENST00000364804 214 ntBASIC2.54□□□□□ -2
AP3D1O14617 MIR128-1-201ENST00000384921 82 ntBASIC2.54□□□□□ -2
AP3D1O14617 MIR29B2-201ENST00000385055 81 ntBASIC2.54□□□□□ -2
AP3D1O14617 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.54□□□□□ -2
AP3D1O14617 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.54□□□□□ -2
AP3D1O14617 RN7SKP158-201ENST00000410453 326 ntBASIC2.54□□□□□ -2
AP3D1O14617 USP9YP18-201ENST00000425912 695 ntBASIC2.54□□□□□ -2
AP3D1O14617 RPS15AP10-201ENST00000432472 382 ntBASIC2.54□□□□□ -2
AP3D1O14617 AC009238.1-201ENST00000442165 424 ntBASIC2.54□□□□□ -2
AP3D1O14617 AC009237.6-201ENST00000446969 424 ntBASIC2.54□□□□□ -2
AP3D1O14617 AL031659.1-201ENST00000447075 539 ntBASIC2.54□□□□□ -2
AP3D1O14617 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.54□□□□□ -2
AP3D1O14617 S100A11P2-201ENST00000467589 312 ntBASIC2.54□□□□□ -2
AP3D1O14617 AC018868.1-201ENST00000491307 315 ntBASIC2.54□□□□□ -2
AP3D1O14617 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.54□□□□□ -2
AP3D1O14617 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.54□□□□□ -2
AP3D1O14617 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.54□□□□□ -2
AP3D1O14617 RNU5F-2P-201ENST00000516066 82 ntBASIC2.54□□□□□ -2
AP3D1O14617 Y_RNA.665-201ENST00000516177 98 ntBASIC2.54□□□□□ -2
AP3D1O14617 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.54□□□□□ -2
AP3D1O14617 CYCSP26-201ENST00000534107 320 ntBASIC2.54□□□□□ -2
AP3D1O14617 AC245884.12-201ENST00000615364 59 ntBASIC2.54□□□□□ -2
AP3D1O14617 AC090517.3-201ENST00000625170 141 ntBASIC2.54□□□□□ -2
AP3D1O14617 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
AP3D1O14617 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.54□□□□□ -2
AP3D1O14617 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
AP3D1O14617 AC080100.1-201ENST00000624239 5356 ntBASIC2.53□□□□□ -2
AP3D1O14617 RNU6-1106P-201ENST00000390845 107 ntBASIC2.53□□□□□ -2
AP3D1O14617 RNU4-26P-201ENST00000410270 107 ntBASIC2.53□□□□□ -2
AP3D1O14617 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.53□□□□□ -2
AP3D1O14617 RPL23AP95-201ENST00000426806 265 ntBASIC2.53□□□□□ -2
AP3D1O14617 MRPS10P2-201ENST00000431226 381 ntBASIC2.53□□□□□ -2
AP3D1O14617 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.53□□□□□ -2
AP3D1O14617 AL359672.1-201ENST00000442302 409 ntBASIC2.53□□□□□ -2
AP3D1O14617 IFNA11P-201ENST00000446352 526 ntBASIC2.53□□□□□ -2
AP3D1O14617 RPS3P1-201ENST00000456781 192 ntBASIC2.53□□□□□ -2
AP3D1O14617 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.53□□□□□ -2
AP3D1O14617 AC083904.1-201ENST00000487828 231 ntBASIC2.53□□□□□ -2
AP3D1O14617 AC022447.4-201ENST00000504053 364 ntBASIC2.53□□□□□ -2
AP3D1O14617 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.53□□□□□ -2
AP3D1O14617 AC090136.1-201ENST00000520009 240 ntBASIC2.53□□□□□ -2
AP3D1O14617 MTND1P35-201ENST00000526739 508 ntBASIC2.53□□□□□ -2
AP3D1O14617 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.53□□□□□ -2
AP3D1O14617 AC025423.5-201ENST00000550230 219 ntBASIC2.53□□□□□ -2
AP3D1O14617 AC074050.1-201ENST00000563247 211 ntBASIC2.53□□□□□ -2
AP3D1O14617 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.53□□□□□ -2
AP3D1O14617 AP001836.1-201ENST00000604675 523 ntBASIC2.53□□□□□ -2
AP3D1O14617 FAM157A-202ENST00000615155 405 ntBASIC2.53□□□□□ -2
AP3D1O14617 MIR203B-201ENST00000636080 86 ntBASIC2.53□□□□□ -2
AP3D1O14617 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
AP3D1O14617 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.53□□□□□ -2
AP3D1O14617 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
AP3D1O14617 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
AP3D1O14617 Y_RNA.6-201ENST00000362350 114 ntBASIC2.52□□□□□ -2.01
AP3D1O14617 snoU2_19.1-201ENST00000362361 80 ntBASIC2.52□□□□□ -2.01
AP3D1O14617 SNORA3A-201ENST00000364113 130 ntBASIC2.52□□□□□ -2.01
AP3D1O14617 SNORA25B-201ENST00000365507 128 ntBASIC2.52□□□□□ -2.01
AP3D1O14617 RNU6-1329P-201ENST00000365664 107 ntBASIC2.52□□□□□ -2.01
AP3D1O14617 MIR491-201ENST00000384877 84 ntBASIC2.52□□□□□ -2.01
AP3D1O14617 MIR592-201ENST00000384959 97 ntBASIC2.52□□□□□ -2.01
AP3D1O14617 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
AP3D1O14617 SNORA48.2-201ENST00000390926 124 ntBASIC2.52□□□□□ -2.01
AP3D1O14617 RN7SKP61-201ENST00000410642 295 ntBASIC2.52□□□□□ -2.01
AP3D1O14617 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.52□□□□□ -2.01
AP3D1O14617 AL135938.1-201ENST00000443141 297 ntBASIC2.52□□□□□ -2.01
AP3D1O14617 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.52□□□□□ -2.01
AP3D1O14617 RNU6-1037P-201ENST00000459571 107 ntBASIC2.52□□□□□ -2.01
AP3D1O14617 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.52□□□□□ -2.01
AP3D1O14617 HMGB1P35-201ENST00000503360 598 ntBASIC2.52□□□□□ -2.01
AP3D1O14617 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.52□□□□□ -2.01
AP3D1O14617 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.52□□□□□ -2.01
AP3D1O14617 MIR3200-201ENST00000580767 85 ntBASIC2.52□□□□□ -2.01
AP3D1O14617 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
AP3D1O14617 BNIP3P22-201ENST00000593399 556 ntBASIC2.52□□□□□ -2.01
AP3D1O14617 AC018889.1-201ENST00000605372 397 ntBASIC2.52□□□□□ -2.01
AP3D1O14617 AC104458.1-201ENST00000608243 463 ntBASIC2.52□□□□□ -2.01
AP3D1O14617 AC064836.2-201ENST00000609491 462 ntBASIC2.52□□□□□ -2.01
AP3D1O14617 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.52□□□□□ -2.01
AP3D1O14617 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
AP3D1O14617 RMST_3.1-201ENST00000611651 109 ntBASIC2.52□□□□□ -2.01
AP3D1O14617 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms