Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AL365204.3-201ENST00000612448 685 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.15□□□□□ -2.39
CACNA1AO00555 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.15□□□□□ -2.39
CACNA1AO00555 RNU6-657P-201ENST00000383904 107 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 Y_RNA.439-201ENST00000384119 94 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 Y_RNA.452-201ENST00000384202 108 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 RNU6-1065P-201ENST00000384513 106 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
CACNA1AO00555 MIR888-201ENST00000401186 77 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 AL049545.1-201ENST00000401856 572 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.15□□□□□ -2.39
CACNA1AO00555 UBE2V1P8-201ENST00000437166 265 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.15□□□□□ -2.39
CACNA1AO00555 VN1R10P-201ENST00000447106 875 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.15□□□□□ -2.39
CACNA1AO00555 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.15□□□□□ -2.39
CACNA1AO00555 AC084024.2-201ENST00000503480 791 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 HMGN1P13-201ENST00000505795 138 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 PSMC1P5-201ENST00000512850 177 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 SNORA25.11-201ENST00000515935 105 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 ACA64.5-201ENST00000516207 127 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 RNU6-1183P-201ENST00000517054 60 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 RNA5SP290-201ENST00000517133 127 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.15□□□□□ -2.39
CACNA1AO00555 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.15□□□□□ -2.39
CACNA1AO00555 AC027104.1-201ENST00000563702 681 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 AC091805.2-201ENST00000603848 235 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 AC007363.1-201ENST00000604736 620 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 AC239868.4-201ENST00000608318 671 ntBASIC0.15□□□□□ -2.39
CACNA1AO00555 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.15□□□□□ -2.39
CACNA1AO00555 MIR302D-201ENST00000362275 68 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 MIR506-201ENST00000384998 124 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 MIR10B-201ENST00000385011 110 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
CACNA1AO00555 PIGFP2-201ENST00000421400 651 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 AC027119.1-201ENST00000440877 241 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 GAPDHP17-201ENST00000449858 1001 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 AC104073.1-201ENST00000451988 151 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 MTND2P24-201ENST00000453434 806 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 SUMO1P1-201ENST00000497904 306 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.14□□□□□ -2.39
CACNA1AO00555 AC124947.2-202ENST00000552735 133 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.14□□□□□ -2.39
CACNA1AO00555 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.14□□□□□ -2.39
CACNA1AO00555 AC012065.4-201ENST00000602445 679 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 AC004805.2-201ENST00000605382 482 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.14□□□□□ -2.39
CACNA1AO00555 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
CACNA1AO00555 AC017037.3-201ENST00000625016 472 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
CACNA1AO00555 LINC02555-201ENST00000563933 1951 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
CACNA1AO00555 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.14□□□□□ -2.39
CACNA1AO00555 MTND4LP10-201ENST00000435146 291 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 FABP5P14-201ENST00000437273 393 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 NDUFA5P7-201ENST00000452914 242 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 snoU109.2-201ENST00000459316 135 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 RPL36AP48-201ENST00000485521 314 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
CACNA1AO00555 RNA5SP404-201ENST00000517118 132 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 AL590705.4-201ENST00000532209 134 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.14□□□□□ -2.39
CACNA1AO00555 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.14□□□□□ -2.39
CACNA1AO00555 AL020997.3-201ENST00000602843 359 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 AL391813.1-201ENST00000603098 260 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 AC012507.3-201ENST00000603556 477 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 HMGB1P51-201ENST00000605166 638 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 NDUFA8P1-201ENST00000605525 367 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 AC117490.2-201ENST00000610042 594 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 AC079416.3-201ENST00000624479 549 ntBASIC0.14□□□□□ -2.39
CACNA1AO00555 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.13□□□□□ -2.39
CACNA1AO00555 RNU6-891P-201ENST00000384280 111 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 SNORD14D-201ENST00000384390 87 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 MIR597-201ENST00000384968 97 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 MIR95-201ENST00000385072 81 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 NDUFS5P1-201ENST00000405668 289 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 RAP1BP3-201ENST00000407180 549 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 MIR1267-201ENST00000408723 78 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.13□□□□□ -2.39
CACNA1AO00555 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.13□□□□□ -2.39
CACNA1AO00555 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 MTCYBP32-201ENST00000427945 1084 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.13□□□□□ -2.39
CACNA1AO00555 AL050341.1-201ENST00000447743 313 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 KATNBL1P6-201ENST00000453433 915 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 AL049874.1-201ENST00000489560 388 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.13□□□□□ -2.39
CACNA1AO00555 AP001893.2-201ENST00000526949 202 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.13□□□□□ -2.39
CACNA1AO00555 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.13□□□□□ -2.39
CACNA1AO00555 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.13□□□□□ -2.39
CACNA1AO00555 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.13□□□□□ -2.39
CACNA1AO00555 AC090079.2-201ENST00000575289 768 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 MIR3115-201ENST00000577915 68 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 AC091152.3-201ENST00000604227 325 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 uc_338.15-201ENST00000615470 191 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 AL603758.1-201ENST00000618654 241 ntBASIC0.13□□□□□ -2.39
CACNA1AO00555 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms