Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC079140.3-201ENST00000511111 550 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.11□□□□□ -2.39
HMGN4O00479 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.11□□□□□ -2.39
HMGN4O00479 SNORD60.2-201ENST00000516883 86 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.11□□□□□ -2.39
HMGN4O00479 SNORA4-201ENST00000584302 138 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 HMGN1P30-201ENST00000589286 268 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 AP001981.2-201ENST00000603241 418 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 Z83818.1-201ENST00000603584 150 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 AC069114.2-201ENST00000604699 304 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 AP001033.2-201ENST00000609701 1003 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 MIR6734-201ENST00000621166 68 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
HMGN4O00479 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.1□□□□□ -2.39
HMGN4O00479 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
HMGN4O00479 RNU6-37P-201ENST00000362692 107 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 RNU6-11P-201ENST00000364234 107 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 RNU6-1-201ENST00000383898 107 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 RNU6-42P-201ENST00000384165 107 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 RNU6-36P-201ENST00000384172 107 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 RNU6-4P-201ENST00000384205 107 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 RNU6-5P-201ENST00000384238 107 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 RNU6-3P-201ENST00000384314 107 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 RNU6-2-201ENST00000384627 107 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 RNU6-9-201ENST00000384776 107 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 RNU6-1237P-201ENST00000384777 107 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 RNU6-33P-201ENST00000384793 107 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.1□□□□□ -2.39
HMGN4O00479 MTND1P21-201ENST00000412991 285 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.1□□□□□ -2.39
HMGN4O00479 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.1□□□□□ -2.39
HMGN4O00479 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.1□□□□□ -2.39
HMGN4O00479 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.1□□□□□ -2.39
HMGN4O00479 TXNL1P1-201ENST00000429528 554 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 ZNF965P-201ENST00000432501 817 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 MTCO3P45-201ENST00000443036 613 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 MTATP6P30-201ENST00000443540 664 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.1□□□□□ -2.39
HMGN4O00479 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.1□□□□□ -2.39
HMGN4O00479 RN7SKP12-201ENST00000516275 143 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.1□□□□□ -2.39
HMGN4O00479 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.1□□□□□ -2.39
HMGN4O00479 MIR4637-201ENST00000582405 84 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 RNU6-6P-201ENST00000606623 107 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 RNU6-87P-201ENST00000607561 108 ntBASIC0.1□□□□□ -2.39
HMGN4O00479 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
HMGN4O00479 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.39
HMGN4O00479 Y_RNA.332-201ENST00000365271 113 ntBASIC0.09□□□□□ -2.4
HMGN4O00479 RNU6-1176P-201ENST00000390955 107 ntBASIC0.09□□□□□ -2.4
HMGN4O00479 RNU2-70P-201ENST00000410718 179 ntBASIC0.09□□□□□ -2.4
HMGN4O00479 RNU6-1054P-201ENST00000411293 104 ntBASIC0.09□□□□□ -2.4
HMGN4O00479 TPMTP2-201ENST00000414372 726 ntBASIC0.09□□□□□ -2.4
HMGN4O00479 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.09□□□□□ -2.4
HMGN4O00479 AL035398.1-201ENST00000430869 322 ntBASIC0.09□□□□□ -2.4
HMGN4O00479 AL445305.1-201ENST00000432577 575 ntBASIC0.09□□□□□ -2.4
HMGN4O00479 NEFMP1-201ENST00000443423 1006 ntBASIC0.09□□□□□ -2.4
HMGN4O00479 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.09□□□□□ -2.4
HMGN4O00479 AL353752.1-201ENST00000454946 260 ntBASIC0.09□□□□□ -2.4
HMGN4O00479 snoU13.27-201ENST00000459278 104 ntBASIC0.09□□□□□ -2.4
HMGN4O00479 MED28P2-201ENST00000475771 317 ntBASIC0.09□□□□□ -2.4
HMGN4O00479 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.09□□□□□ -2.4
HMGN4O00479 TMEM251P1-201ENST00000503717 318 ntBASIC0.09□□□□□ -2.4
HMGN4O00479 RNU6-714P-201ENST00000516963 103 ntBASIC0.09□□□□□ -2.4
HMGN4O00479 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.09□□□□□ -2.4
HMGN4O00479 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.09□□□□□ -2.4
HMGN4O00479 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.09□□□□□ -2.4
HMGN4O00479 AC023050.2-201ENST00000544968 387 ntBASIC0.09□□□□□ -2.4
HMGN4O00479 AC022022.2-201ENST00000602989 360 ntBASIC0.09□□□□□ -2.4
HMGN4O00479 AC009509.4-201ENST00000619202 509 ntBASIC0.09□□□□□ -2.4
HMGN4O00479 AC245060.5-201ENST00000610778 3293 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 AC090625.1-201ENST00000357130 210 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 Y_RNA.116-201ENST00000363292 103 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 RNA5SP259-201ENST00000365541 109 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 RNU6-969P-201ENST00000383900 105 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 MIR217-201ENST00000384817 110 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 AL357139.1-201ENST00000407792 426 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 Y_RNA.597-201ENST00000410463 100 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.08□□□□□ -2.4
HMGN4O00479 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.08□□□□□ -2.4
HMGN4O00479 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.08□□□□□ -2.4
HMGN4O00479 AL596276.1-201ENST00000434465 418 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.08□□□□□ -2.4
HMGN4O00479 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.08□□□□□ -2.4
HMGN4O00479 ATP5J2P3-201ENST00000451550 258 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 snoU13.30-201ENST00000458951 104 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 snoU13.14-201ENST00000459372 104 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 RPS26P45-201ENST00000471748 340 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 AC048334.1-201ENST00000477975 159 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 AC113410.1-201ENST00000505029 247 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 AC091860.1-201ENST00000505723 432 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.08□□□□□ -2.4
HMGN4O00479 RNU6-390P-201ENST00000516259 103 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 SUMO2P18-201ENST00000518873 252 ntBASIC0.08□□□□□ -2.4
HMGN4O00479 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.08□□□□□ -2.4
HMGN4O00479 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.08□□□□□ -2.4
HMGN4O00479 BNIP3P8-201ENST00000597863 560 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms