Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.41□□□□□ -2.18
SMKR1H3BMG3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.41□□□□□ -2.18
SMKR1H3BMG3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.41□□□□□ -2.18
SMKR1H3BMG3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.41□□□□□ -2.18
SMKR1H3BMG3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.41□□□□□ -2.18
SMKR1H3BMG3 PPP1R2P5-201ENST00000457256 603 ntBASIC1.41□□□□□ -2.18
SMKR1H3BMG3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.41□□□□□ -2.18
SMKR1H3BMG3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.41□□□□□ -2.18
SMKR1H3BMG3 SNORA18.6-201ENST00000516792 115 ntBASIC1.41□□□□□ -2.18
SMKR1H3BMG3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.41□□□□□ -2.18
SMKR1H3BMG3 IGKV3-31-201ENST00000523109 329 ntBASIC1.41□□□□□ -2.18
SMKR1H3BMG3 CBX3P4-201ENST00000538909 354 ntBASIC1.41□□□□□ -2.18
SMKR1H3BMG3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.41□□□□□ -2.18
SMKR1H3BMG3 AC109446.2-201ENST00000567872 497 ntBASIC1.41□□□□□ -2.18
SMKR1H3BMG3 MIR3169-201ENST00000578032 83 ntBASIC1.41□□□□□ -2.18
SMKR1H3BMG3 MIR3944-201ENST00000581277 108 ntBASIC1.41□□□□□ -2.18
SMKR1H3BMG3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.41□□□□□ -2.18
SMKR1H3BMG3 VN1R107P-201ENST00000601784 209 ntBASIC1.41□□□□□ -2.18
SMKR1H3BMG3 AC064872.1-201ENST00000604823 1072 ntBASIC1.41□□□□□ -2.18
SMKR1H3BMG3 AC025754.2-201ENST00000606491 432 ntBASIC1.41□□□□□ -2.18
SMKR1H3BMG3 AC022418.1-201ENST00000624118 445 ntBASIC1.41□□□□□ -2.18
SMKR1H3BMG3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SMKR1H3BMG3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SMKR1H3BMG3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.18
SMKR1H3BMG3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.4□□□□□ -2.19
SMKR1H3BMG3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SMKR1H3BMG3 RNU6-1141P-201ENST00000364520 107 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 RNU4-91P-201ENST00000364778 135 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 RNU6-336P-201ENST00000364891 107 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 RNU6-43P-201ENST00000384302 107 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 Y_RNA.480-201ENST00000384364 102 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 RNU6-434P-201ENST00000384376 107 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 RNU6-393P-201ENST00000384475 107 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 MT-TH-201ENST00000387441 69 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 SNORA12-201ENST00000391162 147 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 NDUFB4P4-201ENST00000404822 243 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 RNA5SP100-201ENST00000410903 110 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 RNA5SP59-201ENST00000410922 110 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.4□□□□□ -2.19
SMKR1H3BMG3 AC010975.2-201ENST00000427781 588 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 AC244670.1-201ENST00000436879 112 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.4□□□□□ -2.19
SMKR1H3BMG3 HMGN2P18-201ENST00000450680 270 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 AC013470.1-201ENST00000453438 462 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 ART2BP-201ENST00000453501 499 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.4□□□□□ -2.19
SMKR1H3BMG3 AC022364.2-201ENST00000457963 554 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 RPS29P15-201ENST00000458329 171 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 RNA5SP269-201ENST00000459032 137 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.4□□□□□ -2.19
SMKR1H3BMG3 AC079140.5-201ENST00000507882 310 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.4□□□□□ -2.19
SMKR1H3BMG3 MIR449C-201ENST00000516047 92 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 RNVU1-2-201ENST00000516326 135 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 SNORA44.1-201ENST00000517031 108 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 RNA5SP490-201ENST00000517141 136 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 AC087441.2-201ENST00000529141 262 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 MIR3198-2-201ENST00000577868 80 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 AC091805.2-201ENST00000603848 235 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 AC116312.1-201ENST00000606841 314 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
SMKR1H3BMG3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 MIR6873-201ENST00000622788 63 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 AC008993.2-201ENST00000631744 806 ntBASIC1.4□□□□□ -2.19
SMKR1H3BMG3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SMKR1H3BMG3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.4□□□□□ -2.19
SMKR1H3BMG3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SMKR1H3BMG3 ZNF680P1-201ENST00000436625 1469 ntBASIC1.39□□□□□ -2.19
SMKR1H3BMG3 FGF7P2-201ENST00000332473 296 ntBASIC1.39□□□□□ -2.19
SMKR1H3BMG3 RNU6-428P-201ENST00000362942 107 ntBASIC1.39□□□□□ -2.19
SMKR1H3BMG3 U3.4-201ENST00000363352 213 ntBASIC1.39□□□□□ -2.19
SMKR1H3BMG3 RNA5SP387-201ENST00000364226 106 ntBASIC1.39□□□□□ -2.19
SMKR1H3BMG3 Y_RNA.332-201ENST00000365271 113 ntBASIC1.39□□□□□ -2.19
SMKR1H3BMG3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.39□□□□□ -2.19
SMKR1H3BMG3 RNU6-26P-201ENST00000383985 107 ntBASIC1.39□□□□□ -2.19
SMKR1H3BMG3 RNU6-692P-201ENST00000384496 107 ntBASIC1.39□□□□□ -2.19
SMKR1H3BMG3 RNY3P10-201ENST00000384764 102 ntBASIC1.39□□□□□ -2.19
SMKR1H3BMG3 MIR934-201ENST00000401241 83 ntBASIC1.39□□□□□ -2.19
SMKR1H3BMG3 AL023284.1-201ENST00000403956 276 ntBASIC1.39□□□□□ -2.19
SMKR1H3BMG3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.39□□□□□ -2.19
SMKR1H3BMG3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.39□□□□□ -2.19
SMKR1H3BMG3 PRPS1P1-201ENST00000445305 876 ntBASIC1.39□□□□□ -2.19
SMKR1H3BMG3 MTCO2P6-201ENST00000463134 685 ntBASIC1.39□□□□□ -2.19
SMKR1H3BMG3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.39□□□□□ -2.19
SMKR1H3BMG3 SNRPGP7-201ENST00000469016 106 ntBASIC1.39□□□□□ -2.19
SMKR1H3BMG3 AC079382.1-201ENST00000493346 557 ntBASIC1.39□□□□□ -2.19
SMKR1H3BMG3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.39□□□□□ -2.19
SMKR1H3BMG3 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.39□□□□□ -2.19
SMKR1H3BMG3 COPS8P3-201ENST00000526024 482 ntBASIC1.39□□□□□ -2.19
SMKR1H3BMG3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.39□□□□□ -2.19
SMKR1H3BMG3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.39□□□□□ -2.19
SMKR1H3BMG3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.39□□□□□ -2.19
SMKR1H3BMG3 MIR4703-201ENST00000577728 79 ntBASIC1.39□□□□□ -2.19
SMKR1H3BMG3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.39□□□□□ -2.19
SMKR1H3BMG3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.39□□□□□ -2.19
SMKR1H3BMG3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.39□□□□□ -2.19
SMKR1H3BMG3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.39□□□□□ -2.19
SMKR1H3BMG3 AC012493.3-201ENST00000604494 112 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms