Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC009090.3-201ENST00000616553 565 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AC138627.2-201ENST00000624202 601 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 FARSBP1-201ENST00000435808 1778 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 SNORD116-20-201ENST00000384529 92 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AC119751.3-201ENST00000399720 670 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 MIR1284-201ENST00000408337 120 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 RNU2-49P-201ENST00000410666 184 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AC011233.1-201ENST00000422812 283 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AL365184.2-201ENST00000431139 435 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 RPL7P34-201ENST00000433316 712 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 GPR143P-201ENST00000434155 205 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AL133217.1-201ENST00000450980 425 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AL139824.2-201ENST00000458731 1095 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 MTND1P3-201ENST00000484956 952 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AC023194.1-201ENST00000493084 308 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 MTCYBP35-201ENST00000503630 1137 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 RNU6-1003P-201ENST00000517099 105 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 MTND1P24-201ENST00000552175 861 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 MIR4287-201ENST00000579398 78 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AL391813.1-201ENST00000603098 260 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AL355297.2-201ENST00000604792 129 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 ELOCP5-201ENST00000604924 333 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 MIR7844-201ENST00000616161 122 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 AP003399.1-201ENST00000637534 361 ntBASIC0.89□□□□□ -2.27
COL6A6A6NMZ7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 AL390237.1-201ENST00000404226 1415 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 AC073343.1-201ENST00000328239 651 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 Y_RNA.159-201ENST00000363674 87 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 MIR513A1-201ENST00000385138 129 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 AL139397.2-201ENST00000404529 772 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 RNU6-757P-201ENST00000410334 100 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 RN7SKP158-201ENST00000410453 326 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 RNU6-1328P-201ENST00000410938 106 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 ELOCP17-201ENST00000414751 326 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 MTCYBP5-201ENST00000423752 1135 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 ISCA1P1-201ENST00000426679 387 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 AC104651.1-201ENST00000427559 735 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 AC079781.2-201ENST00000446424 169 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 EPS15P1-201ENST00000448836 336 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 AL590365.1-201ENST00000450788 243 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 snoU109.1-201ENST00000459339 135 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 AP000797.1-201ENST00000478870 387 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 ACA59.2-201ENST00000517061 156 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 AC022880.1-201ENST00000534017 973 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 AL133241.1-201ENST00000556832 487 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 AC090616.2-202ENST00000584248 222 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 AL590229.1-201ENST00000603497 542 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 AC096720.1-201ENST00000604441 183 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 AL359999.1-201ENST00000604513 294 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 AC091304.6-201ENST00000619761 202 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 AL603839.4-201ENST00000624658 1005 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 MTND4P4-201ENST00000439033 1366 ntBASIC0.88□□□□□ -2.27
COL6A6A6NMZ7 RNU6-220P-201ENST00000390919 107 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 FTH1P15-201ENST00000406984 280 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 RPL31P35-201ENST00000431058 377 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 GTF2IP20-201ENST00000431663 360 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 RPL22P17-201ENST00000438729 315 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AC016691.1-201ENST00000441321 413 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 MTCYBP1-201ENST00000454315 1119 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AK3P2-201ENST00000507976 429 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 SNORA31.6-201ENST00000516241 130 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 RNU6-759P-201ENST00000516740 103 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 SNORA18.6-201ENST00000516792 115 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 RNU6-1183P-201ENST00000517054 60 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 DEFB108E-201ENST00000524692 240 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AC123904.2-201ENST00000548059 300 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 AL596327.1-201ENST00000603629 213 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 TUG1_2.1-201ENST00000614234 87 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 NACAP2-201ENST00000318548 624 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 Y_RNA.97-201ENST00000363094 102 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 RNU5E-7P-201ENST00000365290 117 ntBASIC0.87□□□□□ -2.27
COL6A6A6NMZ7 RNU6-157P-201ENST00000383957 107 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms