Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 EIF4EP4-201ENST00000424916 578 ntBASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 SCARNA18-201ENST00000459004 134 ntBASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 MTCO2P30-201ENST00000503662 364 ntBASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 Y_RNA.665-201ENST00000516177 98 ntBASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 RANP3-201ENST00000530970 276 ntBASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 ADI1P3-201ENST00000549509 470 ntBASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 SNORA59B-202ENST00000578183 701 ntBASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 AP001486.3-201ENST00000615334 372 ntBASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 AC064859.1-201ENST00000624741 174 ntBASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 CASC19-280ENST00000642102 1351 ntBASIC2.35□□□□□ -2.03
TRIM49BA6NDI0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 Y_RNA.86-201ENST00000363020 111 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 RNU6-1252P-201ENST00000363054 104 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 RNU4-66P-201ENST00000365199 138 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 MIR514A2-201ENST00000385131 88 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 MIR514A3-201ENST00000385132 88 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 RNU6-332P-201ENST00000391193 108 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 AL606923.1-201ENST00000406616 190 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 RNA5SP338-201ENST00000410495 85 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 RNU4-53P-201ENST00000410828 140 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 RPL21P90-201ENST00000415692 466 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 AL121601.2-201ENST00000438019 707 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 SEPT14P3-201ENST00000439401 183 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 PRPS1P1-201ENST00000445305 876 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 AL732372.2-207ENST00000445840 183 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 AC092001.1-201ENST00000453012 261 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 SEPT14P2-201ENST00000453405 183 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 RNU6-717P-201ENST00000459076 104 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 AP001324.2-201ENST00000461163 319 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 AC083904.1-201ENST00000487828 231 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 HMGB3P3-201ENST00000510526 400 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 SEPT14P4-201ENST00000513445 186 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 AC025755.1-201ENST00000521306 278 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 FO082796.1-201ENST00000523795 183 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 AC245884.12-201ENST00000615364 59 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 AC002553.4-201ENST00000616896 331 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 uc_338.34-201ENST00000617467 174 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 MIR203B-201ENST00000636080 86 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 AC100810.6-201ENST00000638068 285 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 AP000553.5-201ENST00000641933 54 ntBASIC2.34□□□□□ -2.03
TRIM49BA6NDI0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
TRIM49BA6NDI0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 RNU6-371P-201ENST00000364283 108 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 RNA5SP125-201ENST00000364843 120 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 RNU6-384P-201ENST00000364900 104 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 Z98749.2-208ENST00000381646 500 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 RNU6-877P-201ENST00000383868 107 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 SNORA70B-201ENST00000384210 135 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 SNORD70.1-201ENST00000391007 85 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 AL023284.1-201ENST00000403956 276 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 AL356776.1-201ENST00000406574 447 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 SNORA3.2-201ENST00000408221 125 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 AC003685.2-201ENST00000422795 395 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 TIMM9P3-201ENST00000428659 274 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 HMGN2P26-201ENST00000463169 339 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 DYNLL1P5-201ENST00000467158 270 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 AC117503.1-201ENST00000472241 394 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 RPL21P99-201ENST00000480369 423 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 RNU6-507P-201ENST00000516045 100 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 RNU6-581P-201ENST00000516214 105 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 RNU6-1315P-201ENST00000517187 99 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 AC023050.3-201ENST00000541142 333 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 RNU6-89P-201ENST00000606519 100 ntBASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.33□□□□□ -2.04
TRIM49BA6NDI0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.32□□□□□ -2.04
TRIM49BA6NDI0 RNU1-91P-201ENST00000364746 163 ntBASIC2.32□□□□□ -2.04
TRIM49BA6NDI0 RNU6-1280P-201ENST00000365211 107 ntBASIC2.32□□□□□ -2.04
TRIM49BA6NDI0 SNORA48.3-201ENST00000391081 134 ntBASIC2.32□□□□□ -2.04
TRIM49BA6NDI0 RNU6-876P-201ENST00000391295 104 ntBASIC2.32□□□□□ -2.04
TRIM49BA6NDI0 RNU6-1025P-201ENST00000410629 104 ntBASIC2.32□□□□□ -2.04
TRIM49BA6NDI0 MTATP6P23-201ENST00000440153 476 ntBASIC2.32□□□□□ -2.04
TRIM49BA6NDI0 USP9YP8-201ENST00000441913 500 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms