Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC78A2IDD5 AL021879.1-201ENST00000611756 288 ntBASIC3.38□□□□□ -1.87
CCDC78A2IDD5 MIR5701-2-201ENST00000615634 82 ntBASIC3.38□□□□□ -1.87
CCDC78A2IDD5 MIR4272-201ENST00000635924 64 ntBASIC3.38□□□□□ -1.87
CCDC78A2IDD5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC78A2IDD5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC78A2IDD5 MFSD8-233ENST00000641482 4860 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCDC78A2IDD5 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCDC78A2IDD5 Y_RNA.153-201ENST00000363615 91 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 RNU6-595P-201ENST00000363944 107 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 Y_RNA.276-201ENST00000364732 109 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 RNU5E-7P-201ENST00000365290 117 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 RNU6-72P-201ENST00000384285 79 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 Y_RNA.574-201ENST00000384766 95 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 MIR483-201ENST00000385070 76 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 RNU6-823P-201ENST00000391042 103 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC78A2IDD5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC78A2IDD5 AP002884.2-201ENST00000471647 395 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 AC021205.2-201ENST00000480069 347 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 AC139453.3-201ENST00000493276 369 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 AK3P2-201ENST00000507976 429 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC78A2IDD5 FCF1P8-201ENST00000510322 597 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 SNORA74D-201ENST00000516404 141 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 Y_RNA.687-201ENST00000516558 91 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC78A2IDD5 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC78A2IDD5 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC78A2IDD5 MIR3976-201ENST00000606807 139 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 U2.21-201ENST00000637295 81 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 AC233263.6-201ENST00000631132 1963 ntBASIC3.37□□□□□ -1.87
CCDC78A2IDD5 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
CCDC78A2IDD5 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC78A2IDD5 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC78A2IDD5 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC78A2IDD5 MTND5P9-201ENST00000503854 1755 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC78A2IDD5 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC78A2IDD5 RNU1-70P-201ENST00000362618 164 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 RNU6-99P-201ENST00000364721 107 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 RNU6-702P-201ENST00000364982 107 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 SNORD14.1-201ENST00000365609 90 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 RNU6-198P-201ENST00000384258 104 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 RNU6-784P-201ENST00000384330 106 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCDC78A2IDD5 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCDC78A2IDD5 SAR1AP2-201ENST00000392696 594 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 MIR888-201ENST00000401186 77 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 U3.37-201ENST00000408528 213 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 MIR1252-201ENST00000408861 65 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 AC114482.1-201ENST00000418010 247 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 AC007098.1-201ENST00000420122 367 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 MRPS18CP6-201ENST00000423587 223 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 RPL21P40-201ENST00000428586 483 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC78A2IDD5 RBMY2UP-201ENST00000453474 324 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 BX510359.1-201ENST00000456973 237 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC78A2IDD5 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC78A2IDD5 RNU6-120P-201ENST00000516077 103 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 RNU6-612P-201ENST00000516909 102 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 AC091144.1-201ENST00000519573 138 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 HSBP1P1-201ENST00000555205 166 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 LINC00933-203ENST00000559812 219 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC78A2IDD5 VN1R91P-201ENST00000594377 169 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 AC024153.1-201ENST00000603103 365 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 SNORD58B-201ENST00000607313 66 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 AC100812.1-201ENST00000607622 580 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 AC243829.7-201ENST00000633081 225 ntBASIC3.36□□□□□ -1.87
CCDC78A2IDD5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC78A2IDD5 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC78A2IDD5 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.35□□□□□ -1.87
CCDC78A2IDD5 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CCDC78A2IDD5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC78A2IDD5 AC091812.1-201ENST00000432235 1948 ntBASIC3.35□□□□□ -1.87
CCDC78A2IDD5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
CCDC78A2IDD5 RNU6-227P-201ENST00000362865 103 ntBASIC3.35□□□□□ -1.87
CCDC78A2IDD5 RNU4-42P-201ENST00000364738 142 ntBASIC3.35□□□□□ -1.87
CCDC78A2IDD5 MIR521-1-201ENST00000384902 87 ntBASIC3.35□□□□□ -1.87
CCDC78A2IDD5 RNU6-700P-201ENST00000391043 107 ntBASIC3.35□□□□□ -1.87
CCDC78A2IDD5 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC78A2IDD5 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.35□□□□□ -1.87
CCDC78A2IDD5 MTCO3P19-201ENST00000415864 321 ntBASIC3.35□□□□□ -1.87
CCDC78A2IDD5 DPH3P2-201ENST00000422618 250 ntBASIC3.35□□□□□ -1.87
CCDC78A2IDD5 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC78A2IDD5 AC073910.1-201ENST00000445047 438 ntBASIC3.35□□□□□ -1.87
CCDC78A2IDD5 HIGD1AP2-201ENST00000446367 280 ntBASIC3.35□□□□□ -1.87
CCDC78A2IDD5 RPL37P4-201ENST00000448908 268 ntBASIC3.35□□□□□ -1.87
CCDC78A2IDD5 AL353752.1-201ENST00000454946 260 ntBASIC3.35□□□□□ -1.87
CCDC78A2IDD5 HMGN1P18-201ENST00000457642 277 ntBASIC3.35□□□□□ -1.87
CCDC78A2IDD5 AC110794.1-201ENST00000505816 425 ntBASIC3.35□□□□□ -1.87
CCDC78A2IDD5 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC78A2IDD5 AC009812.2-201ENST00000517657 457 ntBASIC3.35□□□□□ -1.87
CCDC78A2IDD5 AP004607.1-201ENST00000524456 203 ntBASIC3.35□□□□□ -1.87
CCDC78A2IDD5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms