Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 AC095038.3-201ENST00000634439 195 ntBASIC0.84□□□□□ -2.27
TMEM56-RWDD3S4R434 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.84□□□□□ -2.27
TMEM56-RWDD3S4R434 MIR412-201ENST00000362142 91 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 RNU1-22P-201ENST00000363334 158 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 RNU6-26P-201ENST00000383985 107 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 MIR10A-201ENST00000385043 110 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 RNU6-360P-201ENST00000390944 104 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 RPL23AP32-201ENST00000395315 459 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 MRPL35P1-201ENST00000404272 572 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 ELOCP17-201ENST00000414751 326 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 ELOCP9-201ENST00000418624 239 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 AL590556.1-201ENST00000423231 483 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 C8orf59P1-201ENST00000429930 303 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 AL365400.1-201ENST00000431854 640 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 PGBD4P5-201ENST00000445958 426 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 RNU1-131P-201ENST00000458943 161 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 RNA5SP269-201ENST00000459032 137 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 RPL9P9-202ENST00000466501 579 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 AC119751.4-201ENST00000507498 357 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 AC109445.1-201ENST00000512356 383 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 RNA5SP404-201ENST00000517118 132 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 RNA5SP490-201ENST00000517141 136 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 RMST_4.1-201ENST00000616886 107 ntBASIC0.83□□□□□ -2.28
TMEM56-RWDD3S4R434 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 RNU6-190P-201ENST00000384154 102 ntBASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 SNORA17.3-201ENST00000391159 129 ntBASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 FTH1P12-201ENST00000432137 551 ntBASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 LARP1BP3-201ENST00000437229 869 ntBASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 PRPS1P1-201ENST00000445305 876 ntBASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 OR2AQ1P-201ENST00000451972 200 ntBASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 RPS27AP8-201ENST00000452665 445 ntBASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 SNORA3.4-201ENST00000515969 96 ntBASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 AC015712.3-201ENST00000559380 164 ntBASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 HMGB1P33-201ENST00000563485 527 ntBASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 AC009712.1-201ENST00000564938 316 ntBASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 KC877982.1-201ENST00000602313 470 ntBASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 AL022154.1-201ENST00000604698 785 ntBASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 AC112220.3-201ENST00000605502 502 ntBASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 FRG1KP-201ENST00000623592 341 ntBASIC0.82□□□□□ -2.28
TMEM56-RWDD3S4R434 OR4G2P-201ENST00000328113 903 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 SNORA63.3-201ENST00000362682 132 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 SNORD56.1-201ENST00000362913 68 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 Y_RNA.332-201ENST00000365271 113 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 MIR764-201ENST00000390811 85 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 SNORA11.2-201ENST00000408318 127 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 PIGPP2-201ENST00000411569 458 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 RPL21P90-201ENST00000415692 466 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 BTF3P4-201ENST00000418852 495 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 EIF1P1-201ENST00000421436 341 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 RPS6P15-201ENST00000431996 751 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 HMGN2P18-201ENST00000450680 270 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 RPS23P4-201ENST00000487908 423 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 MTND2P33-201ENST00000506452 1031 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 MIR449C-201ENST00000516047 92 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 Y_RNA.687-201ENST00000516558 91 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 Y_RNA.689-201ENST00000516589 107 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 CENPUP1-201ENST00000526649 1202 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 AL391001.1-201ENST00000602747 715 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 AC174048.1-201ENST00000603389 144 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 SCARNA4-202ENST00000625402 129 ntBASIC0.81□□□□□ -2.28
TMEM56-RWDD3S4R434 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 MIR378A-201ENST00000362177 66 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 RNU4-38P-201ENST00000364472 129 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 RNY3P13-201ENST00000365542 102 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 RNU6-946P-201ENST00000383878 107 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 MIR548B-201ENST00000385247 97 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 AC069282.1-201ENST00000411911 526 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 EBAG9P1-201ENST00000418955 543 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 AC108667.1-201ENST00000428618 249 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 NDUFB1P2-201ENST00000449477 176 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 AC087343.1-201ENST00000477341 475 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 SNORA43.2-201ENST00000516652 128 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms