Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CDH9Q9ULB4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CDH9Q9ULB4 SNORD56.1-201ENST00000362913 68 ntBASIC1.83□□□□□ -2.12
CDH9Q9ULB4 RNU6-169P-201ENST00000365336 107 ntBASIC1.83□□□□□ -2.12
CDH9Q9ULB4 RNU6-611P-201ENST00000384276 104 ntBASIC1.83□□□□□ -2.12
CDH9Q9ULB4 Y_RNA.560-201ENST00000384689 102 ntBASIC1.83□□□□□ -2.12
CDH9Q9ULB4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CDH9Q9ULB4 AL158823.1-201ENST00000418441 478 ntBASIC1.83□□□□□ -2.12
CDH9Q9ULB4 USP9YP18-201ENST00000425912 695 ntBASIC1.83□□□□□ -2.12
CDH9Q9ULB4 MTND5P25-201ENST00000430499 799 ntBASIC1.83□□□□□ -2.12
CDH9Q9ULB4 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.83□□□□□ -2.12
CDH9Q9ULB4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.83□□□□□ -2.12
CDH9Q9ULB4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.83□□□□□ -2.12
CDH9Q9ULB4 SNRPFP4-201ENST00000456366 242 ntBASIC1.83□□□□□ -2.12
CDH9Q9ULB4 MTCYBP35-201ENST00000503630 1137 ntBASIC1.83□□□□□ -2.12
CDH9Q9ULB4 MTCO3P9-201ENST00000506989 781 ntBASIC1.83□□□□□ -2.12
CDH9Q9ULB4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.83□□□□□ -2.12
CDH9Q9ULB4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.83□□□□□ -2.12
CDH9Q9ULB4 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.83□□□□□ -2.12
CDH9Q9ULB4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.83□□□□□ -2.12
CDH9Q9ULB4 MIR3618-201ENST00000580330 88 ntBASIC1.83□□□□□ -2.12
CDH9Q9ULB4 MIR4769-201ENST00000584126 77 ntBASIC1.83□□□□□ -2.12
CDH9Q9ULB4 MIR502-201ENST00000606349 86 ntBASIC1.83□□□□□ -2.12
CDH9Q9ULB4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
CDH9Q9ULB4 AL133173.2-201ENST00000614270 90 ntBASIC1.83□□□□□ -2.12
CDH9Q9ULB4 RMST_4.1-201ENST00000616886 107 ntBASIC1.83□□□□□ -2.12
CDH9Q9ULB4 AL359314.1-201ENST00000616913 261 ntBASIC1.83□□□□□ -2.12
CDH9Q9ULB4 AL353997.5-201ENST00000618886 171 ntBASIC1.83□□□□□ -2.12
CDH9Q9ULB4 AC138649.3-201ENST00000622154 254 ntBASIC1.83□□□□□ -2.12
CDH9Q9ULB4 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CDH9Q9ULB4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CDH9Q9ULB4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CDH9Q9ULB4 MIR29C-201ENST00000385231 88 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 RNU6-482P-201ENST00000391068 107 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 OR9R1P-201ENST00000412200 877 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 BTF3L4P1-201ENST00000413813 468 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.82□□□□□ -2.12
CDH9Q9ULB4 C1DP2-201ENST00000418167 426 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.82□□□□□ -2.12
CDH9Q9ULB4 AL358453.1-201ENST00000422522 250 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 MTND4P20-201ENST00000424125 869 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 CALM2P2-201ENST00000428512 440 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 MTND1P30-201ENST00000441241 901 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.82□□□□□ -2.12
CDH9Q9ULB4 AL136380.1-201ENST00000447970 162 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.82□□□□□ -2.12
CDH9Q9ULB4 AC117532.1-201ENST00000514638 323 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 RNU6-237P-201ENST00000515985 71 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 Vault.3-201ENST00000516676 95 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.82□□□□□ -2.12
CDH9Q9ULB4 AC106038.2-201ENST00000520706 568 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.82□□□□□ -2.12
CDH9Q9ULB4 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CDH9Q9ULB4 AC022616.8-201ENST00000533569 253 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.82□□□□□ -2.12
CDH9Q9ULB4 MTATP6P24-201ENST00000576835 677 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 MIR548AB-201ENST00000584917 84 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 BNIP3P8-201ENST00000597863 560 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 AC243960.4-201ENST00000600532 288 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 AL132822.1-201ENST00000617063 513 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 AC008993.2-201ENST00000631744 806 ntBASIC1.82□□□□□ -2.12
CDH9Q9ULB4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.82□□□□□ -2.12
CDH9Q9ULB4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CDH9Q9ULB4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CDH9Q9ULB4 RNU1-17P-201ENST00000363022 152 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 SNORD115-3-201ENST00000363100 82 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 U8.3-201ENST00000363321 132 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 RNU6-944P-201ENST00000364023 107 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 RNA5SP190-201ENST00000365222 118 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 Y_RNA.576-201ENST00000384781 102 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 MIR29B2-201ENST00000385055 81 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 AL356432.1-201ENST00000405809 419 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 RPL31P63-201ENST00000422565 375 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 AC000111.3-201ENST00000433478 193 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 AC073614.1-201ENST00000438690 650 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 RPL23AP6-201ENST00000446637 472 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 PRELID3BP1-201ENST00000457142 540 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 RNU7-125P-201ENST00000458760 62 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 snoU109.1-201ENST00000459339 135 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CDH9Q9ULB4 OR5AL2P-201ENST00000532185 920 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.81□□□□□ -2.12
CDH9Q9ULB4 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.81□□□□□ -2.12
CDH9Q9ULB4 AC018630.3-201ENST00000542637 96 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 ZNF321P-202ENST00000550843 495 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 AC008015.1-201ENST00000555505 465 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 AC004908.3-201ENST00000610248 625 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 AL773524.1-201ENST00000614065 229 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 AC108479.2-201ENST00000617314 601 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 AL159153.1-201ENST00000619688 317 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 AC079248.2-201ENST00000623779 326 ntBASIC1.81□□□□□ -2.12
CDH9Q9ULB4 ZNF72P-201ENST00000425869 1908 ntBASIC1.8□□□□□ -2.12
CDH9Q9ULB4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CDH9Q9ULB4 RNU6-78P-201ENST00000362897 107 ntBASIC1.8□□□□□ -2.12
CDH9Q9ULB4 AL031577.2-201ENST00000404133 280 ntBASIC1.8□□□□□ -2.12
CDH9Q9ULB4 MIR1262-201ENST00000408276 93 ntBASIC1.8□□□□□ -2.12
CDH9Q9ULB4 RPS3AP3-201ENST00000411933 242 ntBASIC1.8□□□□□ -2.12
CDH9Q9ULB4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.8□□□□□ -2.12
CDH9Q9ULB4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms