Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 MTCO3P19-201ENST00000415864 321 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 HMGN2P20-201ENST00000437531 273 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.16□□□□□ -1.74
DDX41Q9UJV9 SNORD105B-201ENST00000458770 79 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.16□□□□□ -1.74
DDX41Q9UJV9 Y_RNA.706-201ENST00000516933 99 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 SNORA31.23-201ENST00000517219 133 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.16□□□□□ -1.74
DDX41Q9UJV9 AL117187.1-201ENST00000555482 181 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 AC104581.2-201ENST00000572227 430 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 AC006600.1-201ENST00000572529 153 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 AC060766.3-201ENST00000591442 263 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 AC124312.5-201ENST00000604451 268 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 SNORD58B-201ENST00000607313 66 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
DDX41Q9UJV9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
DDX41Q9UJV9 AC010680.1-201ENST00000590024 3590 ntBASIC4.15□□□□□ -1.74
DDX41Q9UJV9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.15□□□□□ -1.74
DDX41Q9UJV9 ZNF826P-207ENST00000622273 1910 ntBASIC4.15□□□□□ -1.74
DDX41Q9UJV9 SNORD9-201ENST00000362566 104 ntBASIC4.15□□□□□ -1.75
DDX41Q9UJV9 Y_RNA.133-201ENST00000363428 110 ntBASIC4.15□□□□□ -1.75
DDX41Q9UJV9 MIR544A-201ENST00000384855 91 ntBASIC4.15□□□□□ -1.75
DDX41Q9UJV9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX41Q9UJV9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.15□□□□□ -1.75
DDX41Q9UJV9 PTGES3P4-201ENST00000426243 356 ntBASIC4.15□□□□□ -1.75
DDX41Q9UJV9 AP000907.1-201ENST00000428428 510 ntBASIC4.15□□□□□ -1.75
DDX41Q9UJV9 CYCSP4-201ENST00000429682 331 ntBASIC4.15□□□□□ -1.75
DDX41Q9UJV9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX41Q9UJV9 AC007969.2-201ENST00000441891 191 ntBASIC4.15□□□□□ -1.75
DDX41Q9UJV9 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.15□□□□□ -1.75
DDX41Q9UJV9 RPS3AP12-201ENST00000443616 753 ntBASIC4.15□□□□□ -1.75
DDX41Q9UJV9 AL353705.4-201ENST00000449661 238 ntBASIC4.15□□□□□ -1.75
DDX41Q9UJV9 RNU7-169P-201ENST00000459456 61 ntBASIC4.15□□□□□ -1.75
DDX41Q9UJV9 AC104564.1-201ENST00000493028 407 ntBASIC4.15□□□□□ -1.75
DDX41Q9UJV9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.15□□□□□ -1.75
DDX41Q9UJV9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.15□□□□□ -1.75
DDX41Q9UJV9 CKS1BP7-201ENST00000522230 235 ntBASIC4.15□□□□□ -1.75
DDX41Q9UJV9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.15□□□□□ -1.75
DDX41Q9UJV9 MIR7975-201ENST00000619350 68 ntBASIC4.15□□□□□ -1.75
DDX41Q9UJV9 XIST_intron.1-201ENST00000619444 68 ntBASIC4.15□□□□□ -1.75
DDX41Q9UJV9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
DDX41Q9UJV9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
DDX41Q9UJV9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
DDX41Q9UJV9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
DDX41Q9UJV9 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.15□□□□□ -1.75
DDX41Q9UJV9 Y_RNA.149-201ENST00000363558 117 ntBASIC4.14□□□□□ -1.75
DDX41Q9UJV9 RNU6-487P-201ENST00000365430 104 ntBASIC4.14□□□□□ -1.75
DDX41Q9UJV9 SNORA9-201ENST00000384215 133 ntBASIC4.14□□□□□ -1.75
DDX41Q9UJV9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
DDX41Q9UJV9 SNORA12.2-201ENST00000391040 156 ntBASIC4.14□□□□□ -1.75
DDX41Q9UJV9 Y_RNA.645-201ENST00000391229 102 ntBASIC4.14□□□□□ -1.75
DDX41Q9UJV9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX41Q9UJV9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX41Q9UJV9 AC093852.1-201ENST00000503587 266 ntBASIC4.14□□□□□ -1.75
DDX41Q9UJV9 RNU6-911P-201ENST00000516523 104 ntBASIC4.14□□□□□ -1.75
DDX41Q9UJV9 SNORA31.21-201ENST00000517180 77 ntBASIC4.14□□□□□ -1.75
DDX41Q9UJV9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
DDX41Q9UJV9 AC008011.1-201ENST00000545989 227 ntBASIC4.14□□□□□ -1.75
DDX41Q9UJV9 AC007375.1-201ENST00000554513 578 ntBASIC4.14□□□□□ -1.75
DDX41Q9UJV9 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX41Q9UJV9 MIR4474-201ENST00000579189 78 ntBASIC4.14□□□□□ -1.75
DDX41Q9UJV9 AC113195.1-201ENST00000579952 141 ntBASIC4.14□□□□□ -1.75
DDX41Q9UJV9 Z98751.3-201ENST00000604447 521 ntBASIC4.14□□□□□ -1.75
DDX41Q9UJV9 MIR8058-201ENST00000615737 89 ntBASIC4.14□□□□□ -1.75
DDX41Q9UJV9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
DDX41Q9UJV9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
DDX41Q9UJV9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
DDX41Q9UJV9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
DDX41Q9UJV9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
DDX41Q9UJV9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
DDX41Q9UJV9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.13□□□□□ -1.75
DDX41Q9UJV9 AL049781.1-201ENST00000623195 3585 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 AC058791.1-201ENST00000608412 3198 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
DDX41Q9UJV9 Y_RNA.176-201ENST00000363815 109 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 RNU6-196P-201ENST00000384315 107 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 RNU6-463P-201ENST00000384340 107 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 RNU6-1222P-201ENST00000384615 107 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 Y_RNA.557-201ENST00000384680 107 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 MIR483-201ENST00000385070 76 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 RNU6-823P-201ENST00000391042 103 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 RNA5SP252-201ENST00000391131 119 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 PTMAP5-201ENST00000393073 333 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 MIR190B-201ENST00000401119 79 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 MIR1302-3-201ENST00000408128 138 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 AC023141.4-201ENST00000412031 328 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 AC096649.2-201ENST00000416186 393 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 DPH3P2-201ENST00000422618 250 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 AL031659.1-201ENST00000447075 539 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 OR2AQ1P-201ENST00000451972 200 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 SNRPGP7-201ENST00000469016 106 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 TRBV12-2-201ENST00000489763 344 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 AC016256.1-201ENST00000547971 354 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.13□□□□□ -1.75
DDX41Q9UJV9 AC008269.2-201ENST00000561915 1105 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 MIR5188-201ENST00000583467 113 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.13□□□□□ -1.75
DDX41Q9UJV9 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.13□□□□□ -1.75
DDX41Q9UJV9 U2.1-201ENST00000618978 145 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 156.3 ms