Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC245060.5-201ENST00000610778 3293 ntBASIC0.9□□□□□ -2.27
VPS29Q9UBQ0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 SMIM11P1-201ENST00000369586 178 ntBASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 RPL23AP32-201ENST00000395315 459 ntBASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 VPS26BP1-201ENST00000417155 755 ntBASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 EIF1P1-201ENST00000421436 341 ntBASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 FTH1P12-201ENST00000432137 551 ntBASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 HSPE1P9-201ENST00000440046 311 ntBASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 RPL39P29-201ENST00000447779 157 ntBASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 OR2AQ1P-201ENST00000451972 200 ntBASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 AC093899.1-201ENST00000457984 376 ntBASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 RNU1-131P-201ENST00000458943 161 ntBASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 RNU6-333P-201ENST00000459117 107 ntBASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 COX6CP14-201ENST00000469580 174 ntBASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 AC097473.1-201ENST00000508142 408 ntBASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 RNA5SP490-201ENST00000517141 136 ntBASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 CENPUP1-201ENST00000526649 1202 ntBASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 HMGB1P33-201ENST00000563485 527 ntBASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 AC098848.2-201ENST00000588023 330 ntBASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 AC112220.3-201ENST00000605502 502 ntBASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 AC124016.2-201ENST00000610058 665 ntBASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.89□□□□□ -2.27
VPS29Q9UBQ0 SNORD3E-201ENST00000362899 217 ntBASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 Y_RNA.255-201ENST00000364581 97 ntBASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 RNU6-392P-201ENST00000364926 101 ntBASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 RNU6-190P-201ENST00000384154 102 ntBASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 RNU6-1065P-201ENST00000384513 106 ntBASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 Y_RNA.595-201ENST00000410403 105 ntBASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 C8orf59P1-201ENST00000429930 303 ntBASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 RNA5SP269-201ENST00000459032 137 ntBASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 RNA5SP404-201ENST00000517118 132 ntBASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 MTND3P13-201ENST00000574391 343 ntBASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 AL359821.1-201ENST00000605519 182 ntBASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 MIR15A-201ENST00000607334 83 ntBASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 AL355472.4-201ENST00000610233 626 ntBASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 RMST_4.1-201ENST00000616886 107 ntBASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 AL159153.1-201ENST00000619688 317 ntBASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 AC095038.3-201ENST00000634439 195 ntBASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 AC091948.2-201ENST00000636510 279 ntBASIC0.88□□□□□ -2.27
VPS29Q9UBQ0 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
VPS29Q9UBQ0 MIR412-201ENST00000362142 91 ntBASIC0.87□□□□□ -2.27
VPS29Q9UBQ0 RNU1-22P-201ENST00000363334 158 ntBASIC0.87□□□□□ -2.27
VPS29Q9UBQ0 RNU6-360P-201ENST00000390944 104 ntBASIC0.87□□□□□ -2.27
VPS29Q9UBQ0 RPL23AP36-201ENST00000413895 458 ntBASIC0.87□□□□□ -2.27
VPS29Q9UBQ0 AC092809.3-201ENST00000415453 231 ntBASIC0.87□□□□□ -2.27
VPS29Q9UBQ0 EBAG9P1-201ENST00000418955 543 ntBASIC0.87□□□□□ -2.27
VPS29Q9UBQ0 AL627311.1-201ENST00000431514 115 ntBASIC0.87□□□□□ -2.27
VPS29Q9UBQ0 RPS27P1-201ENST00000450552 247 ntBASIC0.87□□□□□ -2.27
VPS29Q9UBQ0 RPS27AP8-201ENST00000452665 445 ntBASIC0.87□□□□□ -2.27
VPS29Q9UBQ0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.87□□□□□ -2.27
VPS29Q9UBQ0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.87□□□□□ -2.27
VPS29Q9UBQ0 SNORA3.4-201ENST00000515969 96 ntBASIC0.87□□□□□ -2.27
VPS29Q9UBQ0 RNA5SP216-201ENST00000516111 123 ntBASIC0.87□□□□□ -2.27
VPS29Q9UBQ0 AC015688.6-201ENST00000577737 104 ntBASIC0.87□□□□□ -2.27
VPS29Q9UBQ0 AC008507.2-201ENST00000588402 1176 ntBASIC0.87□□□□□ -2.27
VPS29Q9UBQ0 AL391001.1-201ENST00000602747 715 ntBASIC0.87□□□□□ -2.27
VPS29Q9UBQ0 SCARNA4-202ENST00000625402 129 ntBASIC0.87□□□□□ -2.27
VPS29Q9UBQ0 AC092104.1-201ENST00000497346 1441 ntBASIC0.87□□□□□ -2.27
VPS29Q9UBQ0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 OR4G2P-201ENST00000328113 903 ntBASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 MIR520A-201ENST00000384862 85 ntBASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 MIR532-201ENST00000385025 91 ntBASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 MIR10A-201ENST00000385043 110 ntBASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 MIR548B-201ENST00000385247 97 ntBASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 MTCYBP5-201ENST00000423752 1135 ntBASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 TIMM9P1-201ENST00000436122 256 ntBASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 PGBD4P5-201ENST00000445958 426 ntBASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 AC114982.1-201ENST00000469402 321 ntBASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 AP003049.1-201ENST00000529418 457 ntBASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 VN1R82P-201ENST00000601481 356 ntBASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 AL596327.1-201ENST00000603629 213 ntBASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 BNIP3P31-201ENST00000604515 566 ntBASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 AC131235.4-201ENST00000609288 620 ntBASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 AL355816.2-201ENST00000610049 647 ntBASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 MIR8065-201ENST00000620577 100 ntBASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 AL359757.2-201ENST00000624309 274 ntBASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 AC099654.5-201ENST00000636479 350 ntBASIC0.86□□□□□ -2.27
VPS29Q9UBQ0 RNU6-560P-201ENST00000364007 108 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 RNU6-1187P-201ENST00000364771 110 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 Y_RNA.332-201ENST00000365271 113 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 AC069282.1-201ENST00000411911 526 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms