Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.23□□□□□ -1.89
DNMT3BQ9UBC3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
DNMT3BQ9UBC3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 SNORD56.3-201ENST00000363507 71 ntBASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 Y_RNA.187-201ENST00000363918 113 ntBASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 Y_RNA.326-201ENST00000365176 113 ntBASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 RNU1-100P-201ENST00000365255 165 ntBASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 RNU6-43P-201ENST00000384302 107 ntBASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 RNA5SP252-201ENST00000391131 119 ntBASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 Y_RNA.594-201ENST00000410373 140 ntBASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 USP9YP30-201ENST00000430729 455 ntBASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 AL139132.1-201ENST00000431587 344 ntBASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 RPL23AP49-201ENST00000492925 468 ntBASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 AC114801.2-201ENST00000503825 781 ntBASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 MTCYBP40-201ENST00000509390 1135 ntBASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 ACA59.1-201ENST00000515966 143 ntBASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 AC093249.1-201ENST00000567049 203 ntBASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 AC020895.1-201ENST00000595362 272 ntBASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 CYP2C61P-201ENST00000604072 290 ntBASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 AC091903.1-201ENST00000624322 454 ntBASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
DNMT3BQ9UBC3 MTND5P10-201ENST00000603719 1809 ntBASIC3.21□□□□□ -1.89
DNMT3BQ9UBC3 PWAR6-201ENST00000552334 4618 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 RNU6-428P-201ENST00000362942 107 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 RNU6-527P-201ENST00000363425 104 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 SNORA63-201ENST00000363450 132 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 RNU6-1317P-201ENST00000364582 104 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 AL513475.1-201ENST00000406602 315 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 AC022018.1-201ENST00000430685 241 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 RPS15AP5-201ENST00000436276 388 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 ELOCP24-201ENST00000456370 334 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 HMGN1P18-201ENST00000457642 277 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 AC008571.1-201ENST00000467232 300 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 AC027575.1-201ENST00000481064 460 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 SMURF2P1-201ENST00000514992 481 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 Y_RNA.670-201ENST00000516255 105 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 RNU1-143P-201ENST00000516296 146 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 RNU6-307P-201ENST00000516743 106 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 RN7SKP272-201ENST00000516988 232 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 AL442663.2-201ENST00000554385 511 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 RPL12P50-201ENST00000603116 116 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 U1.23-201ENST00000610293 146 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 AC011890.2-201ENST00000613393 294 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 RNU1-68P-201ENST00000615382 146 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 U1.39-201ENST00000621562 146 ntBASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
DNMT3BQ9UBC3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 Y_RNA.2-201ENST00000362330 96 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 RNU6-858P-201ENST00000362436 107 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 RNU6-1227P-201ENST00000383981 107 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 RNU6-692P-201ENST00000384496 107 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 RNU6-310P-201ENST00000384655 107 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 AC245291.1-201ENST00000419501 328 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 AC005534.2-201ENST00000431047 433 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 AL133396.1-201ENST00000432048 687 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 AL031183.1-201ENST00000457667 207 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 AC133134.1-201ENST00000466800 359 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 HMGN2P13-201ENST00000476476 274 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 AC097473.1-201ENST00000508142 408 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 AC116655.1-201ENST00000508324 901 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 AC005741.1-201ENST00000511094 432 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 AC093303.1-201ENST00000514549 295 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 RNU6-581P-201ENST00000516214 105 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 SNORA64.4-201ENST00000516632 81 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 SNORA31.21-201ENST00000517180 77 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 RNU6-711P-201ENST00000517255 106 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 AC006199.1-201ENST00000548728 219 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 CPDP1-201ENST00000579660 283 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 AC011494.1-201ENST00000596454 237 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 VN1R107P-201ENST00000601784 209 ntBASIC3.2□□□□□ -1.9
DNMT3BQ9UBC3 AP001836.1-201ENST00000604675 523 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms