Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.53□□□□□ -2
CPSF2Q9P2I0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.53□□□□□ -2
CPSF2Q9P2I0 AC013470.1-201ENST00000453438 462 ntBASIC2.53□□□□□ -2
CPSF2Q9P2I0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.53□□□□□ -2
CPSF2Q9P2I0 RNU6-333P-201ENST00000459117 107 ntBASIC2.53□□□□□ -2
CPSF2Q9P2I0 snoU13.14-201ENST00000459372 104 ntBASIC2.53□□□□□ -2
CPSF2Q9P2I0 AL121594.1-201ENST00000475906 575 ntBASIC2.53□□□□□ -2
CPSF2Q9P2I0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.53□□□□□ -2
CPSF2Q9P2I0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.53□□□□□ -2
CPSF2Q9P2I0 RNU6-377P-201ENST00000515965 102 ntBASIC2.53□□□□□ -2
CPSF2Q9P2I0 RNA5SP282-201ENST00000516355 108 ntBASIC2.53□□□□□ -2
CPSF2Q9P2I0 RNU6-1038P-201ENST00000516516 104 ntBASIC2.53□□□□□ -2
CPSF2Q9P2I0 RNU6-506P-201ENST00000516553 94 ntBASIC2.53□□□□□ -2
CPSF2Q9P2I0 Y_RNA.704-201ENST00000516851 102 ntBASIC2.53□□□□□ -2
CPSF2Q9P2I0 COPS8P3-201ENST00000526024 482 ntBASIC2.53□□□□□ -2
CPSF2Q9P2I0 CENPUP1-201ENST00000526649 1202 ntBASIC2.53□□□□□ -2
CPSF2Q9P2I0 AP000889.2-201ENST00000532684 490 ntBASIC2.53□□□□□ -2
CPSF2Q9P2I0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.53□□□□□ -2
CPSF2Q9P2I0 AL138976.2-201ENST00000563989 694 ntBASIC2.53□□□□□ -2
CPSF2Q9P2I0 MIR5092-201ENST00000583139 88 ntBASIC2.53□□□□□ -2
CPSF2Q9P2I0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.53□□□□□ -2
CPSF2Q9P2I0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.53□□□□□ -2
CPSF2Q9P2I0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.53□□□□□ -2
CPSF2Q9P2I0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.53□□□□□ -2
CPSF2Q9P2I0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
CPSF2Q9P2I0 AC002543.1-201ENST00000299783 1954 ntBASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 SNORD62.1-201ENST00000362541 86 ntBASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 RNU6-655P-201ENST00000362858 107 ntBASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 RNU4-66P-201ENST00000365199 138 ntBASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 U8.8-201ENST00000365399 135 ntBASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 RNU4-52P-201ENST00000384209 138 ntBASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 MIR128-1-201ENST00000384921 82 ntBASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 MIR95-201ENST00000385072 81 ntBASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 AL355497.1-201ENST00000406262 551 ntBASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 AC105272.1-201ENST00000438604 198 ntBASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 USP9YP8-201ENST00000441913 500 ntBASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 AL031274.1-201ENST00000450334 232 ntBASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 TPTE2P5-203ENST00000458118 728 ntBASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 RNU6-189P-201ENST00000516120 101 ntBASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 RNU7-193P-201ENST00000516723 65 ntBASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 AL159153.1-201ENST00000619688 317 ntBASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CPSF2Q9P2I0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 RNU6-1210P-201ENST00000363775 107 ntBASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 RNU6-1032P-201ENST00000384100 107 ntBASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 MIR514A2-201ENST00000385131 88 ntBASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 MIR514A3-201ENST00000385132 88 ntBASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 MIR9-1-201ENST00000385198 89 ntBASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 POLHP1-201ENST00000411806 470 ntBASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 AIMP1P2-201ENST00000425294 312 ntBASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 CYP2C59P-201ENST00000457790 269 ntBASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 CKS1BP2-201ENST00000497342 240 ntBASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 AC097462.2-201ENST00000504623 481 ntBASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 RNU6-720P-201ENST00000516363 108 ntBASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 CYCSP27-201ENST00000527643 293 ntBASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 EIF1P4-201ENST00000572664 335 ntBASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 AC091135.1-201ENST00000585943 307 ntBASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 AC025165.5-201ENST00000602802 578 ntBASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 AF250324.2-201ENST00000608299 610 ntBASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 U4atac.1-201ENST00000618345 95 ntBASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 AC007792.1-201ENST00000623023 402 ntBASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CPSF2Q9P2I0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CPSF2Q9P2I0 RNU6-82P-201ENST00000363970 107 ntBASIC2.5□□□□□ -2.01
CPSF2Q9P2I0 RNA5SP240-201ENST00000365355 128 ntBASIC2.5□□□□□ -2.01
CPSF2Q9P2I0 Y_RNA.378-201ENST00000365652 113 ntBASIC2.5□□□□□ -2.01
CPSF2Q9P2I0 MIR483-201ENST00000385070 76 ntBASIC2.5□□□□□ -2.01
CPSF2Q9P2I0 AL360182.1-201ENST00000397433 468 ntBASIC2.5□□□□□ -2.01
CPSF2Q9P2I0 AL162578.1-201ENST00000406202 378 ntBASIC2.5□□□□□ -2.01
CPSF2Q9P2I0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.5□□□□□ -2.01
CPSF2Q9P2I0 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.5□□□□□ -2.01
CPSF2Q9P2I0 MTND3P21-201ENST00000433774 331 ntBASIC2.5□□□□□ -2.01
CPSF2Q9P2I0 AL161788.1-201ENST00000441805 169 ntBASIC2.5□□□□□ -2.01
CPSF2Q9P2I0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.5□□□□□ -2.01
CPSF2Q9P2I0 AC068781.1-201ENST00000488231 618 ntBASIC2.5□□□□□ -2.01
CPSF2Q9P2I0 AC079804.2-201ENST00000490376 200 ntBASIC2.5□□□□□ -2.01
CPSF2Q9P2I0 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CPSF2Q9P2I0 SNORA14.1-201ENST00000516113 141 ntBASIC2.5□□□□□ -2.01
CPSF2Q9P2I0 RNU6-1281P-201ENST00000516223 105 ntBASIC2.5□□□□□ -2.01
CPSF2Q9P2I0 SNORA48.11-201ENST00000517015 89 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms