Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ZNF705CP-201ENST00000530515 889 ntBASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 AP002453.2-201ENST00000533503 320 ntBASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 BPTFP1-201ENST00000579209 492 ntBASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 AC060771.1-201ENST00000582031 164 ntBASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 Y_RNA.255-201ENST00000364581 97 ntBASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 SNORA36.2-201ENST00000384004 127 ntBASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 RNA5SP300-201ENST00000391197 107 ntBASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 RNU6-735P-201ENST00000410612 107 ntBASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 RPL17P35-201ENST00000432217 549 ntBASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 SNORD4A-201ENST00000459174 72 ntBASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 AC016065.2-201ENST00000514530 444 ntBASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 AC004584.2-201ENST00000570407 410 ntBASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 MIR3165-201ENST00000579874 75 ntBASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC-0.28□□□□□ -2.45
CHD7Q9P2D1 RNU4-84P-201ENST00000364200 139 ntBASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 RNU11-3P-201ENST00000391111 133 ntBASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 RNA5SP501-201ENST00000410990 112 ntBASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 MTND4P11-201ENST00000417020 1058 ntBASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 RAB11AP1-201ENST00000442978 646 ntBASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 AC023194.1-201ENST00000493084 308 ntBASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 AC093023.1-201ENST00000547375 507 ntBASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 AC092447.9-201ENST00000603395 144 ntBASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 AP000238.1-201ENST00000608759 426 ntBASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 MIR5739-201ENST00000619803 80 ntBASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 AC004009.2-201ENST00000623016 728 ntBASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 RNA5SP109-201ENST00000391010 116 ntBASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 DAP3P1-201ENST00000441522 278 ntBASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 RAD1P2-201ENST00000446414 663 ntBASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 MTND1P22-201ENST00000510572 951 ntBASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC-0.29□□□□□ -2.46
CHD7Q9P2D1 AL049641.1-201ENST00000441055 1948 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 AL390237.1-201ENST00000404226 1415 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 SNORD115-24-201ENST00000363528 82 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 SNORD14C-201ENST00000365382 88 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 SNORA12.1-201ENST00000390873 148 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 MTCO3P12-201ENST00000416718 547 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 GTF2IP20-201ENST00000431663 360 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 RNU7-27P-201ENST00000459281 62 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 AC105185.1-201ENST00000518705 535 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 CYCSP27-201ENST00000527643 293 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 MIR4441-201ENST00000582623 100 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 AC112220.3-201ENST00000605502 502 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 RNY4P7-201ENST00000364600 96 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 AL589872.1-201ENST00000426602 288 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 RNU7-159P-201ENST00000459284 62 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 SNORA31.6-201ENST00000516241 130 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 MTCYBP27-201ENST00000555160 670 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 AC092325.1-201ENST00000566449 554 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 AC004832.4-201ENST00000608952 331 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 MIR6738-201ENST00000619620 64 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 MIR106A-201ENST00000384870 81 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 AL160275.3-201ENST00000423876 471 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 AL590632.1-201ENST00000424289 371 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 SCARNA18-201ENST00000459004 134 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 AC104136.1-201ENST00000512969 394 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 RNA5SP461-201ENST00000516451 104 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 AL590229.1-201ENST00000603497 542 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 AC112187.2-201ENST00000604345 283 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 AC105129.3-201ENST00000605455 485 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 uc_338.15-201ENST00000615470 191 ntBASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.3□□□□□ -2.46
CHD7Q9P2D1 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC-0.31□□□□□ -2.46
CHD7Q9P2D1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC-0.31□□□□□ -2.46
CHD7Q9P2D1 SNORA18.1-201ENST00000363418 128 ntBASIC-0.31□□□□□ -2.46
CHD7Q9P2D1 RNU6-10P-201ENST00000384036 107 ntBASIC-0.31□□□□□ -2.46
CHD7Q9P2D1 RNU6-15P-201ENST00000384534 107 ntBASIC-0.31□□□□□ -2.46
CHD7Q9P2D1 MT-TP-201ENST00000387461 68 ntBASIC-0.31□□□□□ -2.46
CHD7Q9P2D1 AC006548.1-201ENST00000427470 102 ntBASIC-0.31□□□□□ -2.46
CHD7Q9P2D1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC-0.31□□□□□ -2.46
CHD7Q9P2D1 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC-0.31□□□□□ -2.46
CHD7Q9P2D1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.31□□□□□ -2.46
CHD7Q9P2D1 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC-0.31□□□□□ -2.46
CHD7Q9P2D1 AC105029.1-201ENST00000520250 669 ntBASIC-0.31□□□□□ -2.46
CHD7Q9P2D1 AC022616.8-201ENST00000533569 253 ntBASIC-0.31□□□□□ -2.46
CHD7Q9P2D1 AL133370.2-201ENST00000619934 439 ntBASIC-0.31□□□□□ -2.46
CHD7Q9P2D1 CR381572.1-201ENST00000625098 102 ntBASIC-0.31□□□□□ -2.46
CHD7Q9P2D1 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.31□□□□□ -2.46
CHD7Q9P2D1 SNORA63D-201ENST00000364359 132 ntBASIC-0.31□□□□□ -2.46
CHD7Q9P2D1 RNY1P8-201ENST00000383970 114 ntBASIC-0.31□□□□□ -2.46
CHD7Q9P2D1 RNU6-152P-201ENST00000384037 107 ntBASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms