Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SNORD114-6-201ENST00000364393 72 ntBASIC1.28□□□□□ -2.2
VAPAQ9P0L0 RNU6-174P-201ENST00000410406 106 ntBASIC1.28□□□□□ -2.2
VAPAQ9P0L0 RNA5SP111-201ENST00000411386 101 ntBASIC1.28□□□□□ -2.2
VAPAQ9P0L0 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.28□□□□□ -2.2
VAPAQ9P0L0 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.28□□□□□ -2.2
VAPAQ9P0L0 RPS27AP14-201ENST00000422868 454 ntBASIC1.28□□□□□ -2.2
VAPAQ9P0L0 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.28□□□□□ -2.2
VAPAQ9P0L0 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.28□□□□□ -2.2
VAPAQ9P0L0 snoU13.9-201ENST00000458927 103 ntBASIC1.28□□□□□ -2.2
VAPAQ9P0L0 MTCO3P9-201ENST00000506989 781 ntBASIC1.28□□□□□ -2.2
VAPAQ9P0L0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.28□□□□□ -2.2
VAPAQ9P0L0 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.28□□□□□ -2.2
VAPAQ9P0L0 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.28□□□□□ -2.2
VAPAQ9P0L0 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.28□□□□□ -2.2
VAPAQ9P0L0 AC002400.1-201ENST00000569310 726 ntBASIC1.28□□□□□ -2.2
VAPAQ9P0L0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.28□□□□□ -2.2
VAPAQ9P0L0 AL136363.2-201ENST00000604173 851 ntBASIC1.28□□□□□ -2.2
VAPAQ9P0L0 AP000654.2-201ENST00000605633 586 ntBASIC1.28□□□□□ -2.2
VAPAQ9P0L0 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.28□□□□□ -2.2
VAPAQ9P0L0 AL031667.3-201ENST00000620124 655 ntBASIC1.28□□□□□ -2.2
VAPAQ9P0L0 ZNF72P-201ENST00000425869 1908 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 AC233981.2-201ENST00000611524 1614 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 RNU6-39P-201ENST00000384344 107 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.27□□□□□ -2.21
VAPAQ9P0L0 C1DP2-201ENST00000418167 426 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 AC119618.1-201ENST00000434191 222 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 MTND5P2-201ENST00000442927 1142 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 RPL32P28-201ENST00000443577 397 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 AL360271.2-201ENST00000447710 161 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 AC112492.4-201ENST00000456549 352 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.27□□□□□ -2.21
VAPAQ9P0L0 AC130509.1-201ENST00000464158 433 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 AC112204.1-201ENST00000502591 103 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 AC098862.1-201ENST00000504991 413 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.27□□□□□ -2.21
VAPAQ9P0L0 MIR449C-201ENST00000516047 92 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 RNU1-86P-201ENST00000516108 154 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 RNU1-107P-201ENST00000516617 154 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.27□□□□□ -2.21
VAPAQ9P0L0 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.27□□□□□ -2.21
VAPAQ9P0L0 AL031281.1-201ENST00000604049 488 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 AC025811.1-201ENST00000604312 472 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 PRR13P7-201ENST00000605538 430 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 RMST_7.1-201ENST00000621935 268 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 AC120349.3-201ENST00000624377 529 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 AP002371.2-201ENST00000624450 503 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 AL445984.1-201ENST00000637834 659 ntBASIC1.27□□□□□ -2.21
VAPAQ9P0L0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
VAPAQ9P0L0 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
VAPAQ9P0L0 RNU6-78P-201ENST00000362897 107 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 RNU6-203P-201ENST00000384038 104 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 RNU6-533P-201ENST00000384144 107 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 MIR544A-201ENST00000384855 91 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 MIR150-201ENST00000385048 84 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 RAP1BP3-201ENST00000407180 549 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 MIR1289-2-201ENST00000408360 111 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 RPL21P90-201ENST00000415692 466 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.26□□□□□ -2.21
VAPAQ9P0L0 AC007283.2-201ENST00000424739 197 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
VAPAQ9P0L0 DUXAP8-207ENST00000456786 622 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.26□□□□□ -2.21
VAPAQ9P0L0 SNORA59A-201ENST00000459326 152 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 MTCYBP18-201ENST00000501056 747 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 AC010587.1-201ENST00000505809 469 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 RBBP4P6-201ENST00000508098 202 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 AC025465.3-201ENST00000510570 311 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.26□□□□□ -2.21
VAPAQ9P0L0 AP003033.1-201ENST00000527244 415 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 AP002453.2-201ENST00000533503 320 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.26□□□□□ -2.21
VAPAQ9P0L0 SUB1P4-201ENST00000566062 339 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.26□□□□□ -2.21
VAPAQ9P0L0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.26□□□□□ -2.21
VAPAQ9P0L0 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.26□□□□□ -2.21
VAPAQ9P0L0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.26□□□□□ -2.21
VAPAQ9P0L0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.26□□□□□ -2.21
VAPAQ9P0L0 AL157786.1-207ENST00000627771 695 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
VAPAQ9P0L0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.26□□□□□ -2.21
VAPAQ9P0L0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
VAPAQ9P0L0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
VAPAQ9P0L0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
VAPAQ9P0L0 SNORA62.1-201ENST00000364287 154 ntBASIC1.25□□□□□ -2.21
VAPAQ9P0L0 RNU6-1200P-201ENST00000384162 107 ntBASIC1.25□□□□□ -2.21
VAPAQ9P0L0 SNORA24.1-201ENST00000384401 135 ntBASIC1.25□□□□□ -2.21
VAPAQ9P0L0 AL357139.1-201ENST00000407792 426 ntBASIC1.25□□□□□ -2.21
VAPAQ9P0L0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.25□□□□□ -2.21
VAPAQ9P0L0 AC137499.1-201ENST00000427602 88 ntBASIC1.25□□□□□ -2.21
VAPAQ9P0L0 AL591043.1-201ENST00000432461 424 ntBASIC1.25□□□□□ -2.21
VAPAQ9P0L0 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.25□□□□□ -2.21
VAPAQ9P0L0 AC007969.2-201ENST00000441891 191 ntBASIC1.25□□□□□ -2.21
VAPAQ9P0L0 snoU13.15-201ENST00000459407 104 ntBASIC1.25□□□□□ -2.21
VAPAQ9P0L0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.25□□□□□ -2.21
VAPAQ9P0L0 YWHAEP4-201ENST00000505390 198 ntBASIC1.25□□□□□ -2.21
VAPAQ9P0L0 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.25□□□□□ -2.21
VAPAQ9P0L0 AF131216.2-201ENST00000512316 564 ntBASIC1.25□□□□□ -2.21
VAPAQ9P0L0 RPL23AP94-201ENST00000512518 302 ntBASIC1.25□□□□□ -2.21
VAPAQ9P0L0 RNU5F-2P-201ENST00000516066 82 ntBASIC1.25□□□□□ -2.21
VAPAQ9P0L0 RNA5SP490-201ENST00000517141 136 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms