Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 snoU13.30-201ENST00000458951 104 ntBASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 RNU1-95P-201ENST00000516357 160 ntBASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 RNU1-128P-201ENST00000516704 160 ntBASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 RNU6-897P-201ENST00000517135 105 ntBASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 CR383656.8-201ENST00000549046 145 ntBASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 AC021739.1-201ENST00000559631 174 ntBASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 AC010928.2-201ENST00000588017 287 ntBASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 AC125232.2-201ENST00000592457 143 ntBASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 AC019159.1-201ENST00000605094 187 ntBASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 AC062037.2-201ENST00000610137 73 ntBASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 AP000553.6-201ENST00000641242 118 ntBASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 AC110491.1-201ENST00000562191 2010 ntBASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.46□□□□□ -1.85
KCMF1Q9P0J7 Y_RNA.19-201ENST00000362462 99 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 RNA5SP295-201ENST00000362655 121 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 RNA5SP51-201ENST00000364750 119 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 U3.13-201ENST00000364804 214 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 Y_RNA.461-201ENST00000384263 103 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 Y_RNA.476-201ENST00000384347 108 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 AL035423.1-201ENST00000420331 213 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 AC002075.2-201ENST00000425207 252 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 RPL23AP22-201ENST00000437556 453 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 AC009296.1-201ENST00000443146 155 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 MED28P2-201ENST00000475771 317 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 RPL30P1-201ENST00000488676 339 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 RPL23AP75-201ENST00000491601 451 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 RPL7P47-201ENST00000497299 556 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 MTND4LP22-201ENST00000508209 276 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 RN7SKP83-201ENST00000516512 178 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 AC034114.1-201ENST00000520293 285 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 AC006199.1-201ENST00000548728 219 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 MIR3186-201ENST00000577404 85 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 SCARNA4-201ENST00000629045 128 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 AC243829.7-201ENST00000633081 225 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 AL034408.1-202ENST00000636088 415 ntBASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
KCMF1Q9P0J7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 RNU1-76P-201ENST00000362903 159 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 RNU6-770P-201ENST00000363929 105 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 SNORD32A-201ENST00000364805 84 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 SNORA73.2-201ENST00000364946 201 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 Y_RNA.307-201ENST00000365022 117 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 RNU6-1286P-201ENST00000383871 107 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 SNORA5A-201ENST00000384111 134 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 MIR544A-201ENST00000384855 91 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 PTMAP5-201ENST00000393073 333 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 RPL21P75-201ENST00000396599 483 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 RPL21P28-201ENST00000401418 483 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 EIF1AXP1-201ENST00000419267 435 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 AL590556.1-201ENST00000423231 483 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 RPEP5-201ENST00000441137 268 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 AC007969.2-201ENST00000441891 191 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 FCF1P4-201ENST00000448326 183 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 AC012308.1-201ENST00000451232 178 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 U8.22-201ENST00000459141 133 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 RPL21P39-201ENST00000463605 483 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 AC087190.1-201ENST00000484462 480 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 AC107032.1-201ENST00000485945 480 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 AC132942.1-201ENST00000486753 483 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 RN7SL283P-201ENST00000489055 303 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 AC093591.1-201ENST00000491435 481 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 RPL21P16-201ENST00000495531 483 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 AC097462.2-201ENST00000504623 481 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 ANXA2P1-201ENST00000505539 926 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 AC026784.1-201ENST00000507986 352 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 HSPE1P20-201ENST00000538133 289 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 AC009163.5-201ENST00000575421 637 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 MIR3199-2-201ENST00000636243 86 ntBASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
KCMF1Q9P0J7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms