Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.4□□□□□ -1.87
DDX56Q9NY93 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.4□□□□□ -1.87
DDX56Q9NY93 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.4□□□□□ -1.87
DDX56Q9NY93 AC078795.3-201ENST00000602913 472 ntBASIC3.4□□□□□ -1.87
DDX56Q9NY93 U3.45-201ENST00000607547 219 ntBASIC3.4□□□□□ -1.87
DDX56Q9NY93 U1.23-201ENST00000610293 146 ntBASIC3.4□□□□□ -1.87
DDX56Q9NY93 RNU1-68P-201ENST00000615382 146 ntBASIC3.4□□□□□ -1.87
DDX56Q9NY93 AC008121.3-201ENST00000618726 433 ntBASIC3.4□□□□□ -1.87
DDX56Q9NY93 AC104985.2-201ENST00000620598 500 ntBASIC3.4□□□□□ -1.87
DDX56Q9NY93 U1.39-201ENST00000621562 146 ntBASIC3.4□□□□□ -1.87
DDX56Q9NY93 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.4□□□□□ -1.87
DDX56Q9NY93 AC091903.1-201ENST00000624322 454 ntBASIC3.4□□□□□ -1.87
DDX56Q9NY93 AC099654.5-201ENST00000636479 350 ntBASIC3.4□□□□□ -1.87
DDX56Q9NY93 AC112487.2-201ENST00000637950 304 ntBASIC3.4□□□□□ -1.87
DDX56Q9NY93 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
DDX56Q9NY93 RNA5SP119-201ENST00000362715 117 ntBASIC3.39□□□□□ -1.87
DDX56Q9NY93 RNU6-220P-201ENST00000390919 107 ntBASIC3.39□□□□□ -1.87
DDX56Q9NY93 AL078595.1-201ENST00000404458 226 ntBASIC3.39□□□□□ -1.87
DDX56Q9NY93 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX56Q9NY93 AL590556.1-201ENST00000423231 483 ntBASIC3.39□□□□□ -1.87
DDX56Q9NY93 AC008267.5-201ENST00000424928 265 ntBASIC3.39□□□□□ -1.87
DDX56Q9NY93 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX56Q9NY93 RPS27P29-201ENST00000463110 252 ntBASIC3.39□□□□□ -1.87
DDX56Q9NY93 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX56Q9NY93 AC104564.1-201ENST00000493028 407 ntBASIC3.39□□□□□ -1.87
DDX56Q9NY93 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.39□□□□□ -1.87
DDX56Q9NY93 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX56Q9NY93 AC016256.1-201ENST00000547971 354 ntBASIC3.39□□□□□ -1.87
DDX56Q9NY93 AC011611.1-201ENST00000552179 197 ntBASIC3.39□□□□□ -1.87
DDX56Q9NY93 AC090616.3-201ENST00000582184 217 ntBASIC3.39□□□□□ -1.87
DDX56Q9NY93 MIR3922-201ENST00000585192 84 ntBASIC3.39□□□□□ -1.87
DDX56Q9NY93 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX56Q9NY93 AC073657.2-201ENST00000605661 303 ntBASIC3.39□□□□□ -1.87
DDX56Q9NY93 MIR6128-201ENST00000615528 109 ntBASIC3.39□□□□□ -1.87
DDX56Q9NY93 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.39□□□□□ -1.87
DDX56Q9NY93 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX56Q9NY93 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX56Q9NY93 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
DDX56Q9NY93 MTND5P19-201ENST00000424872 1794 ntBASIC3.38□□□□□ -1.87
DDX56Q9NY93 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
DDX56Q9NY93 MIR548F5-201ENST00000408421 86 ntBASIC3.38□□□□□ -1.87
DDX56Q9NY93 RPL37P10-201ENST00000412884 288 ntBASIC3.38□□□□□ -1.87
DDX56Q9NY93 AIMP1P2-201ENST00000425294 312 ntBASIC3.38□□□□□ -1.87
DDX56Q9NY93 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX56Q9NY93 RN7SKP24-201ENST00000515888 284 ntBASIC3.38□□□□□ -1.87
DDX56Q9NY93 Y_RNA.691-201ENST00000516611 103 ntBASIC3.38□□□□□ -1.87
DDX56Q9NY93 RNU6-567P-201ENST00000516746 107 ntBASIC3.38□□□□□ -1.87
DDX56Q9NY93 AC023632.4-201ENST00000517783 191 ntBASIC3.38□□□□□ -1.87
DDX56Q9NY93 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX56Q9NY93 AC021231.3-201ENST00000558497 370 ntBASIC3.38□□□□□ -1.87
DDX56Q9NY93 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX56Q9NY93 AL117336.2-201ENST00000602435 335 ntBASIC3.38□□□□□ -1.87
DDX56Q9NY93 AL162713.1-201ENST00000604480 262 ntBASIC3.38□□□□□ -1.87
DDX56Q9NY93 AL132765.2-201ENST00000610812 351 ntBASIC3.38□□□□□ -1.87
DDX56Q9NY93 AL359198.2-201ENST00000611836 194 ntBASIC3.38□□□□□ -1.87
DDX56Q9NY93 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX56Q9NY93 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DDX56Q9NY93 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
DDX56Q9NY93 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DDX56Q9NY93 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
DDX56Q9NY93 Y_RNA.504-201ENST00000384481 104 ntBASIC3.37□□□□□ -1.87
DDX56Q9NY93 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX56Q9NY93 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX56Q9NY93 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX56Q9NY93 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX56Q9NY93 GPM6BP3-201ENST00000442797 145 ntBASIC3.37□□□□□ -1.87
DDX56Q9NY93 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX56Q9NY93 RPS29P27-201ENST00000463711 170 ntBASIC3.37□□□□□ -1.87
DDX56Q9NY93 MTND4P17-201ENST00000470444 350 ntBASIC3.37□□□□□ -1.87
DDX56Q9NY93 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.37□□□□□ -1.87
DDX56Q9NY93 AC116337.1-201ENST00000509680 687 ntBASIC3.37□□□□□ -1.87
DDX56Q9NY93 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX56Q9NY93 MTND3P22-201ENST00000510932 243 ntBASIC3.37□□□□□ -1.87
DDX56Q9NY93 AC008549.1-201ENST00000512900 643 ntBASIC3.37□□□□□ -1.87
DDX56Q9NY93 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.37□□□□□ -1.87
DDX56Q9NY93 AC091826.1-201ENST00000514065 313 ntBASIC3.37□□□□□ -1.87
DDX56Q9NY93 AC068657.1-201ENST00000520807 306 ntBASIC3.37□□□□□ -1.87
DDX56Q9NY93 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.37□□□□□ -1.87
DDX56Q9NY93 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX56Q9NY93 MIR5571-201ENST00000577998 113 ntBASIC3.37□□□□□ -1.87
DDX56Q9NY93 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.37□□□□□ -1.87
DDX56Q9NY93 C8orf59P2-201ENST00000603441 271 ntBASIC3.37□□□□□ -1.87
DDX56Q9NY93 MIR3976-201ENST00000606807 139 ntBASIC3.37□□□□□ -1.87
DDX56Q9NY93 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.37□□□□□ -1.87
DDX56Q9NY93 AC034229.5-201ENST00000624258 185 ntBASIC3.37□□□□□ -1.87
DDX56Q9NY93 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DDX56Q9NY93 Y_RNA.40-201ENST00000362645 93 ntBASIC3.36□□□□□ -1.87
DDX56Q9NY93 Y_RNA.126-201ENST00000363382 111 ntBASIC3.36□□□□□ -1.87
DDX56Q9NY93 Y_RNA.339-201ENST00000365325 102 ntBASIC3.36□□□□□ -1.87
DDX56Q9NY93 U8.8-201ENST00000365399 135 ntBASIC3.36□□□□□ -1.87
DDX56Q9NY93 MIR29B2-201ENST00000385055 81 ntBASIC3.36□□□□□ -1.87
DDX56Q9NY93 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX56Q9NY93 AC006946.1-201ENST00000429106 328 ntBASIC3.36□□□□□ -1.87
DDX56Q9NY93 RPS3AP52-201ENST00000435639 297 ntBASIC3.36□□□□□ -1.87
DDX56Q9NY93 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX56Q9NY93 AC104389.3-201ENST00000445629 235 ntBASIC3.36□□□□□ -1.87
DDX56Q9NY93 AC008571.1-201ENST00000467232 300 ntBASIC3.36□□□□□ -1.87
DDX56Q9NY93 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX56Q9NY93 FGF7P4-201ENST00000509595 295 ntBASIC3.36□□□□□ -1.87
DDX56Q9NY93 RNA5SP380-201ENST00000517190 98 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms