Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.23□□□□□ -1.89
VPS45Q9NRW7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.23□□□□□ -1.89
VPS45Q9NRW7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VPS45Q9NRW7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VPS45Q9NRW7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS45Q9NRW7 XGY1-201ENST00000381172 446 ntBASIC3.22□□□□□ -1.89
VPS45Q9NRW7 Z98749.2-208ENST00000381646 500 ntBASIC3.22□□□□□ -1.89
VPS45Q9NRW7 Y_RNA.419-201ENST00000384041 102 ntBASIC3.22□□□□□ -1.89
VPS45Q9NRW7 RNU6-95P-201ENST00000384697 107 ntBASIC3.22□□□□□ -1.89
VPS45Q9NRW7 MIR518D-201ENST00000385014 87 ntBASIC3.22□□□□□ -1.89
VPS45Q9NRW7 RN7SKP123-201ENST00000410732 291 ntBASIC3.22□□□□□ -1.89
VPS45Q9NRW7 RNU6-293P-201ENST00000411259 106 ntBASIC3.22□□□□□ -1.89
VPS45Q9NRW7 PGBD4P6-201ENST00000421501 610 ntBASIC3.22□□□□□ -1.89
VPS45Q9NRW7 AL139281.1-201ENST00000422120 335 ntBASIC3.22□□□□□ -1.89
VPS45Q9NRW7 AL590632.1-201ENST00000424289 371 ntBASIC3.22□□□□□ -1.89
VPS45Q9NRW7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS45Q9NRW7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.22□□□□□ -1.89
VPS45Q9NRW7 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS45Q9NRW7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS45Q9NRW7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VPS45Q9NRW7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS45Q9NRW7 RNA5SP385-201ENST00000515947 110 ntBASIC3.22□□□□□ -1.89
VPS45Q9NRW7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.22□□□□□ -1.89
VPS45Q9NRW7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.22□□□□□ -1.89
VPS45Q9NRW7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.22□□□□□ -1.89
VPS45Q9NRW7 MIR3162-201ENST00000581818 82 ntBASIC3.22□□□□□ -1.89
VPS45Q9NRW7 AP000787.2-201ENST00000604432 568 ntBASIC3.22□□□□□ -1.89
VPS45Q9NRW7 MIR6715A-201ENST00000615929 79 ntBASIC3.22□□□□□ -1.89
VPS45Q9NRW7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.22□□□□□ -1.89
VPS45Q9NRW7 AC002064.3-201ENST00000623448 346 ntBASIC3.22□□□□□ -1.89
VPS45Q9NRW7 SCARNA4-202ENST00000625402 129 ntBASIC3.22□□□□□ -1.89
VPS45Q9NRW7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.21□□□□□ -1.89
VPS45Q9NRW7 AC010329.5-201ENST00000623497 2174 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VPS45Q9NRW7 MTND5P19-201ENST00000424872 1794 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS45Q9NRW7 RNU6-601P-201ENST00000384540 107 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 MTCYBP4-201ENST00000401524 249 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 AL356057.2-201ENST00000403318 432 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 RNU2-49P-201ENST00000410666 184 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 RNU6-370P-201ENST00000411008 104 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.21□□□□□ -1.9
VPS45Q9NRW7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.21□□□□□ -1.9
VPS45Q9NRW7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VPS45Q9NRW7 AL161651.1-201ENST00000440882 223 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VPS45Q9NRW7 BTF3P15-201ENST00000455606 336 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS45Q9NRW7 AC091179.1-201ENST00000461606 579 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 AC116337.1-201ENST00000509680 687 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 AC008885.1-201ENST00000514930 301 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 Y_RNA.718-201ENST00000517110 102 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 RNU1-54P-201ENST00000517181 120 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VPS45Q9NRW7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS45Q9NRW7 MIR5690-201ENST00000583739 73 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS45Q9NRW7 ELOCP5-201ENST00000604924 333 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 AC123912.5-201ENST00000605470 343 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 MIR6128-201ENST00000615528 109 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 Z69720.2-201ENST00000624755 279 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 MTND4LP32-201ENST00000636111 270 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VPS45Q9NRW7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS45Q9NRW7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VPS45Q9NRW7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS45Q9NRW7 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.21□□□□□ -1.9
VPS45Q9NRW7 AC000403.1-201ENST00000613696 3585 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS45Q9NRW7 SNORD62.1-201ENST00000362541 86 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 SNORA68.1-201ENST00000364537 132 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 RNU6-1083P-201ENST00000384022 107 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 SNORA7.4-201ENST00000384249 137 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 SNORD116-29-201ENST00000384516 83 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 RNU6-748P-201ENST00000384648 107 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 SNORD73A-201ENST00000386062 65 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 RNY4P36-201ENST00000391116 96 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 AL513475.1-201ENST00000406602 315 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS45Q9NRW7 AC007677.1-201ENST00000445757 515 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 AC006026.2-201ENST00000457376 180 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS45Q9NRW7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS45Q9NRW7 RNA5SP356-201ENST00000515972 94 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 RNU6-1016P-201ENST00000516689 94 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 APOOP3-201ENST00000536787 586 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS45Q9NRW7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS45Q9NRW7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS45Q9NRW7 AC019159.1-201ENST00000605094 187 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS45Q9NRW7 uc_338.14-201ENST00000613162 166 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 AC084781.2-201ENST00000615568 161 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 MIR622-201ENST00000638396 96 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS45Q9NRW7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.2□□□□□ -1.9
VPS45Q9NRW7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS45Q9NRW7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
VPS45Q9NRW7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
VPS45Q9NRW7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 200.3 ms