Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 RNU6-37P-201ENST00000362692 107 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU6-527P-201ENST00000363425 104 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU6-105P-201ENST00000363909 104 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU6-11P-201ENST00000364234 107 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU6-25P-201ENST00000383873 107 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU6-1-201ENST00000383898 107 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 Y_RNA.399-201ENST00000383955 105 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU6-48P-201ENST00000384161 107 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU6-36P-201ENST00000384172 107 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU6-4P-201ENST00000384205 107 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU6-5P-201ENST00000384238 107 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU6-3P-201ENST00000384314 107 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU6-16P-201ENST00000384385 107 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU6-15P-201ENST00000384534 107 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU6-2-201ENST00000384627 107 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU6-29P-201ENST00000384637 107 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU6-9-201ENST00000384776 107 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU6-33P-201ENST00000384793 107 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 MIR561-201ENST00000385216 97 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 SNORA11.4-201ENST00000408823 129 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU4-55P-201ENST00000410731 137 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 AL353193.1-201ENST00000421444 268 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 MTCYBP8-201ENST00000422855 651 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 AC027124.2-201ENST00000428249 105 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 AC073415.1-201ENST00000449240 153 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 AC011753.1-201ENST00000451001 220 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU6-405P-201ENST00000516637 110 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 SNORA25.17-201ENST00000517184 124 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 AC118273.2-201ENST00000532092 465 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 CYCSP26-201ENST00000534107 320 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 AC009063.1-201ENST00000563342 702 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RPS3AP23-202ENST00000574601 686 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 MIR3941-201ENST00000582572 103 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 AC012507.3-201ENST00000603556 477 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 AC123912.5-201ENST00000605470 343 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 RNU6-6P-201ENST00000606623 107 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 AC002044.1-201ENST00000606707 158 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 AL159153.1-201ENST00000619688 317 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 AL354685.2-201ENST00000448218 1447 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 RNU1-23P-201ENST00000363361 144 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 RNU6-266P-201ENST00000364225 107 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 RNU6-1042P-201ENST00000384204 107 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 RNU4-52P-201ENST00000384209 138 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 CBX3P9-201ENST00000402326 552 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 SNORA11.1-201ENST00000408133 129 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 SNORD56-201ENST00000413522 71 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 AIMP1P2-201ENST00000425294 312 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 MTND2P22-201ENST00000444325 1033 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 MTND1P29-201ENST00000448112 647 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 MTCO2P18-201ENST00000457151 658 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 RNU7-167P-201ENST00000459160 62 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 RNU7-180P-201ENST00000459240 63 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 RPL30P12-201ENST00000474666 353 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 AL163973.1-201ENST00000484753 577 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 RNA5SP364-201ENST00000516938 78 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 AC109479.2-201ENST00000517842 174 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 IGLV3-17-201ENST00000519099 244 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 AC022880.1-201ENST00000534017 973 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 SNRPGP18-201ENST00000553000 214 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 MTND1P15-201ENST00000579262 949 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 MIR5583-1-201ENST00000580941 59 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 AC091135.1-201ENST00000585943 307 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 AC004223.2-201ENST00000590309 544 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 AC087683.1-201ENST00000591187 441 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 AL670379.2-201ENST00000604983 252 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 AC097372.5-201ENST00000623665 376 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 AC090517.3-201ENST00000625170 141 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 AL136360.1-201ENST00000503377 1900 ntBASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.69□□□□□ -2.14
CCL28Q9NRJ3 SNORA25B-201ENST00000365507 128 ntBASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 RNU6-1274P-201ENST00000384557 107 ntBASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 MIR483-201ENST00000385070 76 ntBASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 RNU6-1158P-201ENST00000391167 107 ntBASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 RNA5SP270-201ENST00000411361 118 ntBASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 AL663109.1-201ENST00000411498 844 ntBASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 SRIP2-201ENST00000428470 166 ntBASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 RPL39P29-201ENST00000447779 157 ntBASIC1.68□□□□□ -2.14
CCL28Q9NRJ3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms