Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.52□□□□□ -2.17
EXOSC4Q9NPD3 AC092436.1-201ENST00000506450 503 ntBASIC1.52□□□□□ -2.17
EXOSC4Q9NPD3 MTCO3P9-201ENST00000506989 781 ntBASIC1.52□□□□□ -2.17
EXOSC4Q9NPD3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.52□□□□□ -2.17
EXOSC4Q9NPD3 CYCSP27-201ENST00000527643 293 ntBASIC1.52□□□□□ -2.17
EXOSC4Q9NPD3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.52□□□□□ -2.17
EXOSC4Q9NPD3 MIR3682-201ENST00000581338 84 ntBASIC1.52□□□□□ -2.17
EXOSC4Q9NPD3 SEPT7P9-203ENST00000604116 343 ntBASIC1.52□□□□□ -2.17
EXOSC4Q9NPD3 ELOCP5-201ENST00000604924 333 ntBASIC1.52□□□□□ -2.17
EXOSC4Q9NPD3 AP001506.1-201ENST00000615444 211 ntBASIC1.52□□□□□ -2.17
EXOSC4Q9NPD3 uc_338.15-201ENST00000615470 191 ntBASIC1.52□□□□□ -2.17
EXOSC4Q9NPD3 AC026585.1-201ENST00000619582 524 ntBASIC1.52□□□□□ -2.17
EXOSC4Q9NPD3 AC090517.3-201ENST00000625170 141 ntBASIC1.52□□□□□ -2.17
EXOSC4Q9NPD3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.52□□□□□ -2.17
EXOSC4Q9NPD3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
EXOSC4Q9NPD3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.52□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-1010P-201ENST00000362757 107 ntBASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-282P-201ENST00000365357 103 ntBASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-74P-201ENST00000384235 107 ntBASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 RNU2-48P-201ENST00000410694 191 ntBASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 CYCSP33-201ENST00000414485 327 ntBASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 OR6C66P-201ENST00000414917 930 ntBASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 GPR143P-201ENST00000434155 205 ntBASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 AC003989.2-201ENST00000440224 169 ntBASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 RNA5SP182-201ENST00000516064 82 ntBASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 AC110588.1-201ENST00000559699 137 ntBASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 MIR3913-1-201ENST00000577744 102 ntBASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 MIR5692A1-201ENST00000580523 69 ntBASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 AC064872.1-201ENST00000604823 1072 ntBASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 AC098614.4-201ENST00000607601 462 ntBASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 RMST_7.1-201ENST00000621935 268 ntBASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 U6.114-201ENST00000636407 96 ntBASIC1.51□□□□□ -2.17
EXOSC4Q9NPD3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 FARSBP1-201ENST00000435808 1778 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-212P-201ENST00000362642 104 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-1287P-201ENST00000362914 107 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-1303P-201ENST00000364841 107 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-1060P-201ENST00000384664 107 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 MIR583-201ENST00000384846 75 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-550P-201ENST00000391057 101 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 RNU2-3P-201ENST00000410144 191 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 RNU4-26P-201ENST00000410270 107 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 MTND3P17-201ENST00000416968 344 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 AL137159.1-201ENST00000452808 512 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 SNRPFP4-201ENST00000456366 242 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 RPS29P15-201ENST00000458329 171 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 SNORD42A-201ENST00000459584 64 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-1178P-201ENST00000516674 107 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-410P-201ENST00000517006 107 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-586P-201ENST00000517265 104 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 AC022254.1-201ENST00000567857 235 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 DEFB122-202ENST00000569013 197 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 MIR4513-201ENST00000581077 86 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 MIR4775-201ENST00000581168 75 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 AC103810.8-201ENST00000607347 118 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 AC097372.5-201ENST00000623665 376 ntBASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.5□□□□□ -2.17
EXOSC4Q9NPD3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 OR4G2P-201ENST00000328113 903 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 FGF7P2-201ENST00000332473 296 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 snoU2_19.1-201ENST00000362361 80 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 Y_RNA.201-201ENST00000364052 96 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 RNU5A-2P-201ENST00000384337 116 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-1274P-201ENST00000384557 107 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AL356432.1-201ENST00000405809 419 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 RNU6-248P-201ENST00000410720 107 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AL031667.1-201ENST00000440222 725 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 RPS27AP8-201ENST00000452665 445 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AL353752.1-201ENST00000454946 260 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AC006512.1-201ENST00000468816 291 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 AL121594.1-201ENST00000475906 575 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 RPS29P11-201ENST00000496507 171 ntBASIC1.49□□□□□ -2.17
EXOSC4Q9NPD3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms