Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC009646.1-201ENST00000510455 318 ntBASIC1.74□□□□□ -2.13
LRRC40Q9H9A6 RNU6-991P-201ENST00000516168 107 ntBASIC1.74□□□□□ -2.13
LRRC40Q9H9A6 RNU6-685P-201ENST00000517088 95 ntBASIC1.74□□□□□ -2.13
LRRC40Q9H9A6 AC068587.5-201ENST00000528506 175 ntBASIC1.74□□□□□ -2.13
LRRC40Q9H9A6 HSBP1P1-201ENST00000555205 166 ntBASIC1.74□□□□□ -2.13
LRRC40Q9H9A6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.74□□□□□ -2.13
LRRC40Q9H9A6 AL121992.2-201ENST00000606262 256 ntBASIC1.74□□□□□ -2.13
LRRC40Q9H9A6 AL451064.1-201ENST00000607718 471 ntBASIC1.74□□□□□ -2.13
LRRC40Q9H9A6 RMST_4.1-201ENST00000616886 107 ntBASIC1.74□□□□□ -2.13
LRRC40Q9H9A6 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.74□□□□□ -2.13
LRRC40Q9H9A6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
LRRC40Q9H9A6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.74□□□□□ -2.13
LRRC40Q9H9A6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
LRRC40Q9H9A6 U8.13-201ENST00000390842 128 ntBASIC1.73□□□□□ -2.13
LRRC40Q9H9A6 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.73□□□□□ -2.13
LRRC40Q9H9A6 MTATP6P16-201ENST00000434543 526 ntBASIC1.73□□□□□ -2.13
LRRC40Q9H9A6 UBE2D3P4-201ENST00000441973 436 ntBASIC1.73□□□□□ -2.13
LRRC40Q9H9A6 AC008834.1-201ENST00000511612 175 ntBASIC1.73□□□□□ -2.13
LRRC40Q9H9A6 SCARNA24.1-201ENST00000516465 137 ntBASIC1.73□□□□□ -2.13
LRRC40Q9H9A6 RNU6-1220P-201ENST00000517126 108 ntBASIC1.73□□□□□ -2.13
LRRC40Q9H9A6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.73□□□□□ -2.13
LRRC40Q9H9A6 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.73□□□□□ -2.13
LRRC40Q9H9A6 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LRRC40Q9H9A6 AC131159.1-201ENST00000621854 213 ntBASIC1.73□□□□□ -2.13
LRRC40Q9H9A6 AC068787.1-201ENST00000623908 691 ntBASIC1.73□□□□□ -2.13
LRRC40Q9H9A6 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.73□□□□□ -2.13
LRRC40Q9H9A6 AL356292.1-201ENST00000283110 373 ntBASIC1.72□□□□□ -2.13
LRRC40Q9H9A6 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LRRC40Q9H9A6 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
LRRC40Q9H9A6 RNU6-116P-201ENST00000384042 109 ntBASIC1.72□□□□□ -2.13
LRRC40Q9H9A6 Y_RNA.576-201ENST00000384781 102 ntBASIC1.72□□□□□ -2.13
LRRC40Q9H9A6 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.72□□□□□ -2.13
LRRC40Q9H9A6 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.72□□□□□ -2.13
LRRC40Q9H9A6 AC087884.1-201ENST00000469738 328 ntBASIC1.72□□□□□ -2.13
LRRC40Q9H9A6 AC104564.1-201ENST00000493028 407 ntBASIC1.72□□□□□ -2.13
LRRC40Q9H9A6 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.72□□□□□ -2.13
LRRC40Q9H9A6 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.72□□□□□ -2.13
LRRC40Q9H9A6 SNORA3.4-201ENST00000515969 96 ntBASIC1.72□□□□□ -2.13
LRRC40Q9H9A6 CBX3P4-201ENST00000538909 354 ntBASIC1.72□□□□□ -2.13
LRRC40Q9H9A6 AC073539.2-201ENST00000597113 165 ntBASIC1.72□□□□□ -2.13
LRRC40Q9H9A6 AC022022.2-201ENST00000602989 360 ntBASIC1.72□□□□□ -2.13
LRRC40Q9H9A6 AL133173.2-201ENST00000614270 90 ntBASIC1.72□□□□□ -2.13
LRRC40Q9H9A6 AC097372.5-201ENST00000623665 376 ntBASIC1.72□□□□□ -2.13
LRRC40Q9H9A6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.72□□□□□ -2.13
LRRC40Q9H9A6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.72□□□□□ -2.13
LRRC40Q9H9A6 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 RNU6-1222P-201ENST00000384615 107 ntBASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 Y_RNA.598-201ENST00000410480 95 ntBASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 AC011233.1-201ENST00000422812 283 ntBASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 KATNBL1P3-201ENST00000443475 909 ntBASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 TAF9P1-201ENST00000445421 515 ntBASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 TAF9P2-201ENST00000454958 515 ntBASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 RPL23AP63-201ENST00000498752 471 ntBASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 AC104806.1-201ENST00000508720 308 ntBASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 AL356057.1-201ENST00000533798 831 ntBASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 AC009977.1-201ENST00000586015 570 ntBASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 AC091304.9-201ENST00000612091 226 ntBASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
LRRC40Q9H9A6 RNU6-23P-201ENST00000363283 107 ntBASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 RNU6-169P-201ENST00000365336 107 ntBASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 RNU6-607P-201ENST00000411283 108 ntBASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 MTND4P20-201ENST00000424125 869 ntBASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 AC104850.1-201ENST00000435940 476 ntBASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 RNU5F-2P-201ENST00000516066 82 ntBASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 SNORA44.1-201ENST00000517031 108 ntBASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 AK6P1-201ENST00000540219 478 ntBASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 MIR3908-201ENST00000579798 126 ntBASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 MIR4285-201ENST00000581001 85 ntBASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 AP000654.2-201ENST00000605633 586 ntBASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 MIR6845-201ENST00000613182 61 ntBASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 AC009159.2-201ENST00000617603 606 ntBASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 AC138649.3-201ENST00000622154 254 ntBASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 AC130454.1-201ENST00000622948 401 ntBASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
LRRC40Q9H9A6 CBX3P1-201ENST00000325243 554 ntBASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 SNORD115-7-201ENST00000365306 82 ntBASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 RNU6-160P-201ENST00000384591 107 ntBASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 SNORA48.1-201ENST00000390879 135 ntBASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 RNU2-3P-201ENST00000410144 191 ntBASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 RNU6-1245P-201ENST00000411130 106 ntBASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 OR6C66P-201ENST00000414917 930 ntBASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms