Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AL606490.9-201ENST00000603331 271 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 AL590392.1-201ENST00000604960 446 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 MIR6716-201ENST00000613413 80 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 AL365265.1-201ENST00000621045 234 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 AC073308.1-201ENST00000623696 305 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 Z99571.1-201ENST00000636677 394 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS11Q9H270 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS11Q9H270 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS11Q9H270 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
VPS11Q9H270 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.67□□□□□ -1.82
VPS11Q9H270 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS11Q9H270 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS11Q9H270 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS11Q9H270 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS11Q9H270 SNORD81.1-201ENST00000363064 77 ntBASIC3.67□□□□□ -1.82
VPS11Q9H270 Y_RNA.199-201ENST00000364014 102 ntBASIC3.67□□□□□ -1.82
VPS11Q9H270 Y_RNA.480-201ENST00000384364 102 ntBASIC3.67□□□□□ -1.82
VPS11Q9H270 SNORA70C-201ENST00000384538 135 ntBASIC3.67□□□□□ -1.82
VPS11Q9H270 SNORA69.1-201ENST00000390904 137 ntBASIC3.67□□□□□ -1.82
VPS11Q9H270 RNU2-68P-201ENST00000410878 191 ntBASIC3.67□□□□□ -1.82
VPS11Q9H270 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS11Q9H270 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS11Q9H270 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS11Q9H270 AC006539.3-201ENST00000454258 129 ntBASIC3.67□□□□□ -1.82
VPS11Q9H270 AC010099.1-201ENST00000455434 375 ntBASIC3.67□□□□□ -1.82
VPS11Q9H270 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS11Q9H270 MTND3P25-201ENST00000509243 135 ntBASIC3.67□□□□□ -1.82
VPS11Q9H270 RNU6-1278P-201ENST00000516130 107 ntBASIC3.67□□□□□ -1.82
VPS11Q9H270 RNA5SP165-201ENST00000517142 115 ntBASIC3.67□□□□□ -1.82
VPS11Q9H270 RNU6-711P-201ENST00000517255 106 ntBASIC3.67□□□□□ -1.82
VPS11Q9H270 MTND5P41-201ENST00000517498 206 ntBASIC3.67□□□□□ -1.82
VPS11Q9H270 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.67□□□□□ -1.82
VPS11Q9H270 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS11Q9H270 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.67□□□□□ -1.82
VPS11Q9H270 AC099506.2-201ENST00000623074 221 ntBASIC3.67□□□□□ -1.82
VPS11Q9H270 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS11Q9H270 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS11Q9H270 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS11Q9H270 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
VPS11Q9H270 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS11Q9H270 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS11Q9H270 U8.8-201ENST00000365399 135 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 RNU6-47P-201ENST00000383866 107 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 MIR628-201ENST00000385229 95 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 RNA5SP317-201ENST00000410176 116 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 RN7SKP51-201ENST00000410781 304 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 RNA5SP311-201ENST00000411290 116 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 CYCSP33-201ENST00000414485 327 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 RPL21P90-201ENST00000415692 466 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 AC099548.1-201ENST00000421443 426 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 MTND3P9-201ENST00000429526 346 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 AL445305.1-201ENST00000432577 575 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS11Q9H270 AC010401.1-201ENST00000463867 348 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 RN7SL323P-201ENST00000494712 295 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 AC074250.1-201ENST00000511117 192 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 ACA59.1-201ENST00000515966 143 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 RNU7-200P-201ENST00000516105 62 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 RNA5SP315-201ENST00000516340 116 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 SCARNA24.2-201ENST00000516968 130 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 RNA5SP312-201ENST00000517068 116 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 AP006245.1-201ENST00000522549 120 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 AC084851.1-201ENST00000529105 249 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
VPS11Q9H270 AC005344.1-201ENST00000613391 459 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 MIR376A1-201ENST00000616574 68 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS11Q9H270 AL031601.2-202ENST00000622650 282 ntBASIC3.66□□□□□ -1.82
VPS11Q9H270 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS11Q9H270 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS11Q9H270 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VPS11Q9H270 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VPS11Q9H270 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.65□□□□□ -1.82
VPS11Q9H270 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
VPS11Q9H270 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
VPS11Q9H270 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.65□□□□□ -1.82
VPS11Q9H270 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VPS11Q9H270 SPRR2C-201ENST00000290702 219 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 Y_RNA.122-201ENST00000363331 96 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 SNORD50.2-201ENST00000365465 70 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 RNU6-1027P-201ENST00000383998 107 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 RNU6-213P-201ENST00000384051 104 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 MIR578-201ENST00000384828 96 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 MIR888-201ENST00000401186 77 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 SNORA3.3-201ENST00000408712 125 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.65□□□□□ -1.83
VPS11Q9H270 AL159987.2-201ENST00000432754 307 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS11Q9H270 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.65□□□□□ -1.83
VPS11Q9H270 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS11Q9H270 SUMO2P6-201ENST00000505273 288 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 SERF1AP1-201ENST00000514575 187 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 SNORD59.2-201ENST00000516873 68 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 SCARNA14-201ENST00000516903 136 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 RNU6-1315P-201ENST00000517187 99 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 NDUFB9P3-201ENST00000521269 501 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VPS11Q9H270 AC007458.1-201ENST00000542812 373 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 AC123912.5-201ENST00000605470 343 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms