Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 MIR4277-201ENST00000578298 84 ntBASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 MIR4431-201ENST00000579990 94 ntBASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 MIR3658-201ENST00000636291 56 ntBASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NUCKS1Q9H1E3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.66
NUCKS1Q9H1E3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NUCKS1Q9H1E3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
NUCKS1Q9H1E3 AC008568.2-201ENST00000623862 2313 ntBASIC4.65□□□□□ -1.66
NUCKS1Q9H1E3 RNU6-899P-201ENST00000363947 107 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 SNORA72.2-201ENST00000365028 127 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 Y_RNA.542-201ENST00000384641 111 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 MIR513A2-201ENST00000385249 127 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 MIR1179-201ENST00000408703 91 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 AC098614.2-201ENST00000426040 255 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 AC243964.1-201ENST00000441814 261 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 AC074290.1-201ENST00000448883 135 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 AC006517.1-201ENST00000480485 328 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 RPL31P13-201ENST00000484151 370 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 SNORD116-26-201ENST00000516006 96 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 MIR2114-201ENST00000516645 80 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 SNORA43.2-201ENST00000516652 128 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 ZNF192P1-203ENST00000565888 810 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 SNORD84-203ENST00000584275 78 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 DNAJC19P2-201ENST00000593340 302 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 AC244505.7-201ENST00000599675 272 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 SNORA43.4-201ENST00000629559 138 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 AC025031.4-201ENST00000621248 3271 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 MAPK10-372ENST00000641954 3413 ntBASIC4.65□□□□□ -1.67
NUCKS1Q9H1E3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 Y_RNA.101-201ENST00000363154 102 ntBASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 Y_RNA.420-201ENST00000384043 110 ntBASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 RNY4P18-201ENST00000391107 89 ntBASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 MTHFD2P2-201ENST00000407725 247 ntBASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 SNORA11F-201ENST00000408237 128 ntBASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 AC138623.1-201ENST00000418060 216 ntBASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 AC007919.1-201ENST00000429380 217 ntBASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 AC010095.1-201ENST00000443543 144 ntBASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 RPS20P10-201ENST00000451209 253 ntBASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 AC100767.1-201ENST00000528178 123 ntBASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 AC020914.4-201ENST00000597690 277 ntBASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 AL590392.1-201ENST00000604960 446 ntBASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 AL356218.2-201ENST00000605264 187 ntBASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 uc_338.13-201ENST00000618243 179 ntBASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
NUCKS1Q9H1E3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 DEFB108F-201ENST00000344638 222 ntBASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 RNU6-173P-201ENST00000364215 104 ntBASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 RNU6-898P-201ENST00000365627 104 ntBASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 MIR153-1-201ENST00000384914 90 ntBASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 RNU6-381P-201ENST00000391259 108 ntBASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 AL356387.2-201ENST00000422272 243 ntBASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 AC016925.1-201ENST00000458303 298 ntBASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 AC022616.8-201ENST00000533569 253 ntBASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 DEFB117-201ENST00000602356 141 ntBASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 AC026951.1-201ENST00000559530 2459 ntBASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 AL365440.1-201ENST00000436135 2167 ntBASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.63□□□□□ -1.67
NUCKS1Q9H1E3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms