Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC124916.1-201ENST00000444020 547 ntBASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 RPS29P27-201ENST00000463711 170 ntBASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 RNU6-475P-201ENST00000516073 104 ntBASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 Y_RNA.721-201ENST00000517207 102 ntBASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 MIR6134-201ENST00000617606 109 ntBASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 MIR7975-201ENST00000619350 68 ntBASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 MFSD8-233ENST00000641482 4860 ntBASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 ZNF826P-207ENST00000622273 1910 ntBASIC3.21□□□□□ -1.9
AMBRA1Q9C0C7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 MTND5P9-201ENST00000503854 1755 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 AL049781.1-201ENST00000623195 3585 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 SNORD9-201ENST00000362566 104 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 SNORD50.1-201ENST00000362987 71 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 U3.6-201ENST00000363622 211 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 RNU6-105P-201ENST00000363909 104 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 RNU6-595P-201ENST00000363944 107 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 Y_RNA.389-201ENST00000383924 113 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 RNVU1-14-201ENST00000384770 164 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 AP000567.1-201ENST00000406413 156 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 Y_RNA.605-201ENST00000410577 105 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 AL353752.1-201ENST00000454946 260 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 RPS29P20-201ENST00000489592 171 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 PHBP14-201ENST00000512887 367 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 SNORA31.18-201ENST00000517043 134 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 AL451007.1-201ENST00000595491 289 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 HSPE1P7-201ENST00000604681 321 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 MTND4LP5-201ENST00000605152 292 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 SNORD58B-201ENST00000607313 66 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 MIR6076-201ENST00000617521 113 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 MTND5P7-201ENST00000413558 1798 ntBASIC3.2□□□□□ -1.9
AMBRA1Q9C0C7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 AF117829.1-206ENST00000621883 3802 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 AL021368.2-201ENST00000606125 5352 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 RNA5SP383-201ENST00000362934 120 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 Y_RNA.455-201ENST00000384230 98 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 AL356968.1-201ENST00000416622 474 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 AC096644.2-201ENST00000429278 159 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 AL591043.1-201ENST00000432461 424 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 SNRPEP4-201ENST00000435815 279 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 AC106707.2-201ENST00000484182 374 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 RPL23AP49-201ENST00000492925 468 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 RPS27AP10-201ENST00000496103 208 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 AC104619.4-201ENST00000510773 249 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 AC107934.2-201ENST00000518653 310 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 HSBP1P1-201ENST00000555205 166 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 AC008269.2-201ENST00000561915 1105 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 MIR5701-3-201ENST00000578890 82 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 MIR5701-1-201ENST00000585138 82 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 AC020895.1-201ENST00000595362 272 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 MIR5701-2-201ENST00000615634 82 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 AL132822.1-201ENST00000617063 513 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 7SK.10-201ENST00000621414 298 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 AL356274.2-201ENST00000624379 3752 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 AC002546.1-201ENST00000588041 2504 ntBASIC3.19□□□□□ -1.9
AMBRA1Q9C0C7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 AC004944.1-201ENST00000517807 3059 ntBASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 RNA5SP50-201ENST00000363731 107 ntBASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 Y_RNA.424-201ENST00000384063 103 ntBASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 RNU6-784P-201ENST00000384330 106 ntBASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 Y_RNA.500-201ENST00000384466 111 ntBASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 Y_RNA.557-201ENST00000384680 107 ntBASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 HMGB3P2-201ENST00000411913 584 ntBASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 AL590664.1-201ENST00000448065 339 ntBASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 RPL26P9-201ENST00000457466 433 ntBASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 RPL23AP67-201ENST00000465341 474 ntBASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 RNU1-143P-201ENST00000516296 146 ntBASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 RNU7-4P-201ENST00000516961 62 ntBASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 216.4 ms