Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.15□□□□□ -1.91
CIPCQ9C0C6 RNA5SP217-201ENST00000515959 91 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 RNU1-143P-201ENST00000516296 146 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.15□□□□□ -1.91
CIPCQ9C0C6 MIR4782-201ENST00000577987 79 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 MIR4680-201ENST00000580906 66 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.15□□□□□ -1.91
CIPCQ9C0C6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.15□□□□□ -1.91
CIPCQ9C0C6 AL355598.1-201ENST00000604169 202 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 AC005046.1-201ENST00000608515 625 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 U1.23-201ENST00000610293 146 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 RNU1-68P-201ENST00000615382 146 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 U1.39-201ENST00000621562 146 ntBASIC3.15□□□□□ -1.91
CIPCQ9C0C6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.15□□□□□ -1.91
CIPCQ9C0C6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.15□□□□□ -1.91
CIPCQ9C0C6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.14□□□□□ -1.91
CIPCQ9C0C6 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CIPCQ9C0C6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CIPCQ9C0C6 RNU6-428P-201ENST00000362942 107 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 Y_RNA.158-201ENST00000363651 101 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 RNU6-270P-201ENST00000364131 105 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 RNU1-73P-201ENST00000383971 164 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 SNORA54-201ENST00000384281 123 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 RNU6-933P-201ENST00000384424 107 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 MIR518D-201ENST00000385014 87 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 MRPL42P3-201ENST00000401492 326 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.14□□□□□ -1.91
CIPCQ9C0C6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.14□□□□□ -1.91
CIPCQ9C0C6 RPS15AP10-201ENST00000432472 382 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 RPL23AP50-201ENST00000434149 455 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.14□□□□□ -1.91
CIPCQ9C0C6 AC022447.4-201ENST00000504053 364 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.14□□□□□ -1.91
CIPCQ9C0C6 SNORA25.10-201ENST00000515926 124 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 ACA59.1-201ENST00000515966 143 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 AC109479.2-201ENST00000517842 174 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.14□□□□□ -1.91
CIPCQ9C0C6 CBX3P8-201ENST00000532412 525 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 AMZ2P1-203ENST00000565833 850 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.14□□□□□ -1.91
CIPCQ9C0C6 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.14□□□□□ -1.91
CIPCQ9C0C6 AC005014.2-201ENST00000607795 599 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 AC093732.2-201ENST00000607950 274 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 AC006157.1-201ENST00000611750 366 ntBASIC3.14□□□□□ -1.91
CIPCQ9C0C6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CIPCQ9C0C6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CIPCQ9C0C6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CIPCQ9C0C6 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.13□□□□□ -1.91
CIPCQ9C0C6 Y_RNA.48-201ENST00000362710 103 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 RNU6-78P-201ENST00000362897 107 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 RNU6-884P-201ENST00000363889 107 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 Y_RNA.364-201ENST00000365532 101 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 Y_RNA.459-201ENST00000384251 102 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 RNU6-658P-201ENST00000384606 106 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 RNU6-1106P-201ENST00000390845 107 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 RN7SKP220-201ENST00000410611 288 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.13□□□□□ -1.91
CIPCQ9C0C6 RPL26P27-201ENST00000414397 437 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 RPL32P35-201ENST00000415214 394 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 MRPS18CP6-201ENST00000423587 223 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.13□□□□□ -1.91
CIPCQ9C0C6 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.13□□□□□ -1.91
CIPCQ9C0C6 MTND3P2-201ENST00000438452 342 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 AC098831.1-201ENST00000440661 216 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 AC025750.2-201ENST00000442609 450 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.13□□□□□ -1.91
CIPCQ9C0C6 RNA5SP310-201ENST00000459084 116 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 FO393415.2-201ENST00000480085 343 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 AC068781.1-201ENST00000488231 618 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 RNU1-61P-201ENST00000516107 151 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 RNU6-928P-201ENST00000516876 104 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 Y_RNA.720-201ENST00000517166 92 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 SNORD116.3-201ENST00000517176 78 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 AC093331.1-201ENST00000521474 169 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 SYF2P1-201ENST00000550658 413 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.13□□□□□ -1.91
CIPCQ9C0C6 SUB1P3-201ENST00000564581 315 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 AC018889.1-201ENST00000605372 397 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 AF117829.1-206ENST00000621883 3802 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 AC048347.1-201ENST00000624621 427 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 SCARNA4-202ENST00000625402 129 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 U4.7-201ENST00000638126 106 ntBASIC3.13□□□□□ -1.91
CIPCQ9C0C6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CIPCQ9C0C6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CIPCQ9C0C6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CIPCQ9C0C6 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CIPCQ9C0C6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CIPCQ9C0C6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CIPCQ9C0C6 RNU5E-7P-201ENST00000365290 117 ntBASIC3.12□□□□□ -1.91
CIPCQ9C0C6 RNU1-115P-201ENST00000365329 160 ntBASIC3.12□□□□□ -1.91
CIPCQ9C0C6 Y_RNA.428-201ENST00000384078 102 ntBASIC3.12□□□□□ -1.91
CIPCQ9C0C6 RNU6-1035P-201ENST00000384477 107 ntBASIC3.12□□□□□ -1.91
CIPCQ9C0C6 MIR888-201ENST00000401186 77 ntBASIC3.12□□□□□ -1.91
CIPCQ9C0C6 AL591034.2-201ENST00000402839 359 ntBASIC3.12□□□□□ -1.91
CIPCQ9C0C6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.12□□□□□ -1.91
CIPCQ9C0C6 HMGN2P30-201ENST00000423237 256 ntBASIC3.12□□□□□ -1.91
CIPCQ9C0C6 TMEM167AP1-201ENST00000423409 219 ntBASIC3.12□□□□□ -1.91
CIPCQ9C0C6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms