Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 AL133383.2-201ENST00000622958 2336 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 LINC02471-203ENST00000641941 4752 ntBASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM56Q9BRZ2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 RNU6-858P-201ENST00000362436 107 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 RNU6-1159P-201ENST00000362933 107 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 Y_RNA.82-201ENST00000363000 102 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 RNU5B-2P-201ENST00000363036 113 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 Y_RNA.92-201ENST00000363043 102 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 Y_RNA.230-201ENST00000364348 109 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 Y_RNA.235-201ENST00000364412 102 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 SNORD32A-201ENST00000364805 84 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 Y_RNA.306-201ENST00000365015 102 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 Y_RNA.312-201ENST00000365089 102 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 Y_RNA.322-201ENST00000365151 102 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 RNA5SP240-201ENST00000365355 128 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 RNU6-487P-201ENST00000365430 104 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 RNU6-493P-201ENST00000391321 108 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 RNU2-37P-201ENST00000410695 177 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 AL606753.1-201ENST00000427435 87 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 RPS29P17-201ENST00000430795 166 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 AC007969.2-201ENST00000441891 191 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 SNRPGP5-201ENST00000456003 220 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 Y_RNA.650-201ENST00000459002 102 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 RPL26P26-201ENST00000480251 434 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 SNORD116-28-201ENST00000516123 91 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 Y_RNA.777-201ENST00000516982 102 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 IGKV2-38-201ENST00000517443 247 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 CKS1BP7-201ENST00000522230 235 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 MIR5695-201ENST00000579717 85 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 MIR3609-201ENST00000582661 80 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 MIR4282-201ENST00000583613 67 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 Y_RNA.771-201ENST00000598668 102 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 AL713866.2-201ENST00000603579 219 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 Y_RNA.789-201ENST00000622480 102 ntBASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM56Q9BRZ2 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 AC073073.2-201ENST00000609827 2578 ntBASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 RNU6-1280P-201ENST00000365211 107 ntBASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 Y_RNA.570-201ENST00000384750 101 ntBASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 MIR10B-201ENST00000385011 110 ntBASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 RPL32P34-201ENST00000486380 400 ntBASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 RN7SL810P-201ENST00000493031 276 ntBASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 AC091874.1-201ENST00000511402 339 ntBASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 RNA5SP73-201ENST00000516744 108 ntBASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 AC022655.2-201ENST00000577280 318 ntBASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 AC020895.1-201ENST00000595362 272 ntBASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 MIR6076-201ENST00000617521 113 ntBASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 MIR7702-201ENST00000621931 59 ntBASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 AL079305.1-201ENST00000623159 3008 ntBASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM56Q9BRZ2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 UBE2WP1-201ENST00000362030 340 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 MIR410-201ENST00000362222 80 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 RNU6-626P-201ENST00000363354 107 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 RNU6-1141P-201ENST00000364520 107 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 Y_RNA.291-201ENST00000364886 113 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 SNORD113-1-201ENST00000365321 69 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 RNY1P5-201ENST00000383890 115 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 MIR1179-201ENST00000408703 91 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 RN7SKP61-201ENST00000410642 295 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 BPY2DP-201ENST00000422208 265 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 FTH1P6-201ENST00000430768 320 ntBASIC4.19□□□□□ -1.74
TRIM56Q9BRZ2 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms