Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RNU1-73P-201ENST00000383971 164 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 RNU6-1035P-201ENST00000384477 107 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 RNU6-1160P-201ENST00000384546 104 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 MIR23B-201ENST00000384832 97 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 RNU1-101P-201ENST00000391171 127 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 MIR888-201ENST00000401186 77 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 RNU6-293P-201ENST00000411259 106 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.28□□□□□ -2.04
VGLL1Q99990 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.28□□□□□ -2.04
VGLL1Q99990 USMG5P1-201ENST00000425964 177 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 AC006946.1-201ENST00000429106 328 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.28□□□□□ -2.04
VGLL1Q99990 PCMTD1P1-201ENST00000455560 355 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 RNA5SP310-201ENST00000459084 116 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 snoU109.2-201ENST00000459316 135 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 RN7SL863P-201ENST00000462370 296 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 AC018437.1-201ENST00000492214 406 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 RNU6-470P-201ENST00000515954 104 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 RNU6-976P-201ENST00000516086 111 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 RNU6-327P-201ENST00000516270 127 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 RNU6-1137P-201ENST00000517073 99 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
VGLL1Q99990 AC103996.1-201ENST00000555468 102 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
VGLL1Q99990 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.28□□□□□ -2.04
VGLL1Q99990 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.28□□□□□ -2.04
VGLL1Q99990 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.28□□□□□ -2.04
VGLL1Q99990 AC008121.1-201ENST00000603244 268 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
VGLL1Q99990 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 AC007318.2-201ENST00000620999 243 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 U6.105-201ENST00000637379 88 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 U4.7-201ENST00000638126 106 ntBASIC2.28□□□□□ -2.04
VGLL1Q99990 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VGLL1Q99990 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VGLL1Q99990 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VGLL1Q99990 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.27□□□□□ -2.05
VGLL1Q99990 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.27□□□□□ -2.05
VGLL1Q99990 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.27□□□□□ -2.05
VGLL1Q99990 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
VGLL1Q99990 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
VGLL1Q99990 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
VGLL1Q99990 RNU6-884P-201ENST00000363889 107 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 RNA5SP72-201ENST00000364442 117 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 RNU6-1317P-201ENST00000364582 104 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 U8.8-201ENST00000365399 135 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 SNORA41-201ENST00000384675 132 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 MIR183-201ENST00000384958 110 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 MIR670-201ENST00000390142 98 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 RPS29P13-201ENST00000402041 169 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 RPL26P27-201ENST00000414397 437 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 AC099548.1-201ENST00000421443 426 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.27□□□□□ -2.05
VGLL1Q99990 BX276092.3-201ENST00000424182 230 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VGLL1Q99990 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.27□□□□□ -2.05
VGLL1Q99990 AC006028.1-201ENST00000438379 402 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 DAP3P1-201ENST00000441522 278 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.27□□□□□ -2.05
VGLL1Q99990 AL035666.1-201ENST00000446195 348 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 MTND4P19-201ENST00000446659 478 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.27□□□□□ -2.05
VGLL1Q99990 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.27□□□□□ -2.05
VGLL1Q99990 RNU6-1037P-201ENST00000459571 107 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 RPS29P27-201ENST00000463711 170 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 RN7SL601P-201ENST00000471221 293 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.27□□□□□ -2.05
VGLL1Q99990 AC109925.1-201ENST00000478069 331 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.27□□□□□ -2.05
VGLL1Q99990 RPS29P20-201ENST00000489592 171 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 RPS27AP10-201ENST00000496103 208 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.27□□□□□ -2.05
VGLL1Q99990 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.27□□□□□ -2.05
VGLL1Q99990 AC006445.2-201ENST00000510061 472 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.27□□□□□ -2.05
VGLL1Q99990 RNU6-699P-201ENST00000517081 110 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VGLL1Q99990 AC109446.1-201ENST00000566172 220 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.27□□□□□ -2.05
VGLL1Q99990 UBL5P2-201ENST00000583788 219 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
VGLL1Q99990 AC009314.1-201ENST00000603871 304 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 AC016925.2-201ENST00000605108 242 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 MIR3976-201ENST00000606807 139 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 AC011890.2-201ENST00000613393 294 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 AC133104.2-201ENST00000615272 193 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.27□□□□□ -2.05
VGLL1Q99990 PISRT1.1-201ENST00000616930 107 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 AC018692.3-201ENST00000623929 123 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 U6.99-201ENST00000637524 83 ntBASIC2.27□□□□□ -2.05
VGLL1Q99990 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VGLL1Q99990 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
VGLL1Q99990 CUL1P1-201ENST00000509510 2425 ntBASIC2.26□□□□□ -2.05
VGLL1Q99990 AC073325.2-201ENST00000339545 159 ntBASIC2.26□□□□□ -2.05
VGLL1Q99990 RNU6-78P-201ENST00000362897 107 ntBASIC2.26□□□□□ -2.05
VGLL1Q99990 SNORA7.4-201ENST00000384249 137 ntBASIC2.26□□□□□ -2.05
VGLL1Q99990 MIR34A-201ENST00000385130 110 ntBASIC2.26□□□□□ -2.05
VGLL1Q99990 RNU4-47P-201ENST00000410876 114 ntBASIC2.26□□□□□ -2.05
VGLL1Q99990 MCFD2P1-201ENST00000417812 300 ntBASIC2.26□□□□□ -2.05
VGLL1Q99990 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms