Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AP000238.1-201ENST00000608759 426 ntBASIC-0.13□□□□□ -2.43
COL12A1Q99715 AC092106.3-201ENST00000611308 722 ntBASIC-0.13□□□□□ -2.43
COL12A1Q99715 AC100810.6-201ENST00000638068 285 ntBASIC-0.13□□□□□ -2.43
COL12A1Q99715 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
COL12A1Q99715 RNA5SP192-201ENST00000364404 120 ntBASIC-0.14□□□□□ -2.43
COL12A1Q99715 RNU6-929P-201ENST00000384429 107 ntBASIC-0.14□□□□□ -2.43
COL12A1Q99715 SNORD71-201ENST00000411292 86 ntBASIC-0.14□□□□□ -2.43
COL12A1Q99715 MTCO3P18-201ENST00000440206 761 ntBASIC-0.14□□□□□ -2.43
COL12A1Q99715 AC243964.1-201ENST00000441814 261 ntBASIC-0.14□□□□□ -2.43
COL12A1Q99715 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL12A1Q99715 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL12A1Q99715 FTX_2.1-201ENST00000618816 94 ntBASIC-0.14□□□□□ -2.43
COL12A1Q99715 AL078595.3-201ENST00000623815 1166 ntBASIC-0.14□□□□□ -2.43
COL12A1Q99715 AC091965.5-201ENST00000624785 342 ntBASIC-0.14□□□□□ -2.43
COL12A1Q99715 ENSAP3-201ENST00000312710 333 ntBASIC-0.14□□□□□ -2.43
COL12A1Q99715 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.14□□□□□ -2.43
COL12A1Q99715 MIR200A-201ENST00000384875 90 ntBASIC-0.14□□□□□ -2.43
COL12A1Q99715 MT-TP-201ENST00000387461 68 ntBASIC-0.14□□□□□ -2.43
COL12A1Q99715 RNU6-952P-201ENST00000391164 108 ntBASIC-0.14□□□□□ -2.43
COL12A1Q99715 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.14□□□□□ -2.43
COL12A1Q99715 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL12A1Q99715 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
COL12A1Q99715 AC006026.2-201ENST00000457376 180 ntBASIC-0.14□□□□□ -2.43
COL12A1Q99715 AC025465.3-201ENST00000510570 311 ntBASIC-0.14□□□□□ -2.43
COL12A1Q99715 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL12A1Q99715 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC-0.14□□□□□ -2.43
COL12A1Q99715 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL12A1Q99715 RNU4-23P-201ENST00000362839 140 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 RNU6-414P-201ENST00000363705 104 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC-0.15□□□□□ -2.43
COL12A1Q99715 RNU6-943P-201ENST00000516960 98 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC-0.15□□□□□ -2.43
COL12A1Q99715 POC1B-211ENST00000549504 581 ntTSL 5 BASIC-0.15□□□□□ -2.43
COL12A1Q99715 SNRPGP20-201ENST00000604477 205 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 AL022345.1-201ENST00000607292 135 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 SNORD115-3-201ENST00000363100 82 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 RNU4-16P-201ENST00000364737 141 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 MIR320B1-201ENST00000390209 79 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 RNA5SP109-201ENST00000391010 116 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 RNU11-3P-201ENST00000391111 133 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 RNU2-21P-201ENST00000410368 188 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 AC092809.3-201ENST00000415453 231 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC-0.15□□□□□ -2.43
COL12A1Q99715 TRAPPC13P1-201ENST00000435991 1062 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.15□□□□□ -2.43
COL12A1Q99715 RPS29P15-201ENST00000458329 171 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 snoU13.7-201ENST00000459220 104 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 AC084024.2-201ENST00000503480 791 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 AC093534.1-201ENST00000504977 132 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 AC074344.1-201ENST00000512823 224 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC-0.15□□□□□ -2.43
COL12A1Q99715 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC-0.15□□□□□ -2.43
COL12A1Q99715 RNA5SP93-201ENST00000362525 114 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 SNORD1A-201ENST00000364968 72 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 MIR218-1-201ENST00000384999 110 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 SNORD89-201ENST00000390981 114 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 RNA5SP300-201ENST00000391197 107 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC-0.15□□□□□ -2.43
COL12A1Q99715 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC-0.15□□□□□ -2.43
COL12A1Q99715 PNPLA4P1-201ENST00000458328 305 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 SNORA40.12-201ENST00000516329 111 ntBASIC-0.15□□□□□ -2.43
COL12A1Q99715 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC-0.15□□□□□ -2.43
COL12A1Q99715 AL049737.1-201ENST00000413920 1403 ntBASIC-0.16□□□□□ -2.43
COL12A1Q99715 AL391994.1-201ENST00000254724 282 ntBASIC-0.16□□□□□ -2.43
COL12A1Q99715 RNU6-25P-201ENST00000383873 107 ntBASIC-0.16□□□□□ -2.43
COL12A1Q99715 RNU6-29P-201ENST00000384637 107 ntBASIC-0.16□□□□□ -2.43
COL12A1Q99715 RNU2-7P-201ENST00000410794 178 ntBASIC-0.16□□□□□ -2.43
COL12A1Q99715 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.16□□□□□ -2.43
COL12A1Q99715 MTCO1P20-201ENST00000425366 358 ntBASIC-0.16□□□□□ -2.43
COL12A1Q99715 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.16□□□□□ -2.43
COL12A1Q99715 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC-0.16□□□□□ -2.43
COL12A1Q99715 RNU1-131P-201ENST00000458943 161 ntBASIC-0.16□□□□□ -2.43
COL12A1Q99715 AC104136.1-201ENST00000512969 394 ntBASIC-0.16□□□□□ -2.43
COL12A1Q99715 RNU6-27P-201ENST00000516146 107 ntBASIC-0.16□□□□□ -2.43
COL12A1Q99715 HAUS1P3-201ENST00000523909 662 ntBASIC-0.16□□□□□ -2.43
COL12A1Q99715 MTND2P26-201ENST00000528255 1029 ntBASIC-0.16□□□□□ -2.43
COL12A1Q99715 AC125611.1-201ENST00000549563 229 ntBASIC-0.16□□□□□ -2.43
COL12A1Q99715 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.16□□□□□ -2.43
COL12A1Q99715 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.16□□□□□ -2.43
COL12A1Q99715 AL391834.1-201ENST00000609609 560 ntBASIC-0.16□□□□□ -2.43
COL12A1Q99715 AC010809.3-201ENST00000621310 641 ntBASIC-0.16□□□□□ -2.43
COL12A1Q99715 AC009033.1-201ENST00000624279 431 ntBASIC-0.16□□□□□ -2.43
COL12A1Q99715 AC010615.1-201ENST00000594254 1764 ntBASIC-0.16□□□□□ -2.44
COL12A1Q99715 RNU6-529P-201ENST00000363383 104 ntBASIC-0.16□□□□□ -2.44
COL12A1Q99715 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.16□□□□□ -2.44
COL12A1Q99715 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC-0.16□□□□□ -2.44
COL12A1Q99715 AC024257.5-201ENST00000612739 531 ntBASIC-0.16□□□□□ -2.44
COL12A1Q99715 MTND5P33-201ENST00000571250 1450 ntBASIC-0.16□□□□□ -2.44
COL12A1Q99715 Y_RNA.186-201ENST00000363899 92 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 RNA5SP219-201ENST00000390940 113 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 MTND4P20-201ENST00000424125 869 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.17□□□□□ -2.44
COL12A1Q99715 AC116347.2-201ENST00000514912 523 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 SNORA31.4-201ENST00000516049 129 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 AC233702.2-202ENST00000562547 291 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 AC087481.2-201ENST00000565492 330 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms